RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 TISP43B9A030 160 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 LRRN2O75325 713 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 VARSP26640 1264 aaKnown RBP20.27■□□□□ 0.84
SMPD1-210ENST00000534405 NEK3P51956 506 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 ZNF568Q3ZCX4 644 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 GLG1Q92896 1179 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 EPB41L1Q9H4G0 881 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 PTTG2Q9NZH5 202 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 PKD2L1Q9P0L9 805 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 FRMD4BQ9Y2L6 1034 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 PFASO15067 1338 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 IPO5O00410 1097 aaKnown RBP20.26■□□□□ 0.83
SMPD1-210ENST00000534405 MAGEB2O15479 319 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 BCRP11274 1271 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 SERPINB3P29508 390 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 FOXN2P32314 431 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 NPEPPSP55786 919 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 CDR2Q01850 454 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 LONRF1Q17RB8 773 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 PHLDB3Q6NSJ2 640 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 ARHGEF26Q96DR7 871 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 CADM1Q9BY67 442 aaKnown RBP20.26■□□□□ 0.83
SMPD1-210ENST00000534405 SAR1AQ9NR31 198 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.26■□□□□ 0.83
SMPD1-210ENST00000534405 PPP1R9AQ9ULJ8 1098 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 CNTNAP1P78357 1384 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 BRAFP15056 766 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 ITGB5P18084 799 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 FUT4P22083 530 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 DLG4P78352 724 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 ARHGAP44Q17R89 818 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 DCAF12L1Q5VU92 463 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 LDHDQ86WU2 507 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 LMO3Q8TAP4 145 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 SPIRE2Q8WWL2 714 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 WDR11Q9BZH6 1224 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 NDUFA13Q9P0J0 144 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 APEX2Q9UBZ4 518 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 MRPL11Q9Y3B7 192 aaKnown RBP20.26■□□□□ 0.83
SMPD1-210ENST00000534405 UBE4BO95155 1302 aa20.26■□□□□ 0.83
SMPD1-210ENST00000534405 ADARP55265 1226 aaKnown RBP20.25■□□□□ 0.83
SMPD1-210ENST00000534405 MYL7Q01449 175 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 PPATQ06203 517 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 BFSP1Q12934 665 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 ITGA9Q13797 1035 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 FLAD1Q8NFF5 587 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 CHURC1Q8WUH1 139 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 KCNN1Q92952 543 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 MAML3Q96JK9 1138 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 TEKT3Q9BXF9 490 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 ZNF70Q9UC06 446 aaPredicted RBP20.25■□□□□ 0.83
SMPD1-210ENST00000534405 NCANO14594 1321 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 EXOC3O60645 756 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 PIM1P11309 404 aaPredicted RBP20.25■□□□□ 0.83
SMPD1-210ENST00000534405 LMNB1P20700 586 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 RFFLQ8WZ73 363 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 ABTB1Q969K4 478 aaPredicted RBP20.25■□□□□ 0.83
SMPD1-210ENST00000534405 COL20A1Q9P218 1284 aa20.25■□□□□ 0.83
SMPD1-210ENST00000534405 ARHGEF35A5YM69 484 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 FOXN3O00409 490 aaPredicted RBP20.24■□□□□ 0.83
SMPD1-210ENST00000534405 DDX3YO15523 660 aaKnown RBP20.24■□□□□ 0.83
SMPD1-210ENST00000534405 TMEM253P0C7T8 217 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 MUTP22033 750 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 RGS2P41220 211 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 PTGIRP43119 386 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 RPL21P46778 160 aaKnown RBP20.24■□□□□ 0.83
SMPD1-210ENST00000534405 PPP1R21Q6ZMI0 780 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 TRMT10CQ7L0Y3 403 aaKnown RBP20.24■□□□□ 0.83
SMPD1-210ENST00000534405 SCUBE1Q8IWY4 988 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 FAM151AQ8WW52 585 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 THAP2Q9H0W7 228 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 ERVK-5Q9HDB9 667 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 TMOD2Q9NZR1 351 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 KCND2Q9NZV8 630 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 ASMTLO95671 621 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 PSMD7P51665 324 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 SLC44A4Q53GD3 710 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 IL31RAQ8NI17 732 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 MXRA8Q9BRK3 442 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 PCIF1Q9H4Z3 704 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 INIPQ9NRY2 104 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 NKIRAS1Q9NYS0 192 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 ITGB1BP2Q9UKP3 347 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 AMFRQ9UKV5 643 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 COG5Q9UP83 839 aa20.24■□□□□ 0.83
SMPD1-210ENST00000534405 ALOX15P16050 662 aaPredicted RBP20.23■□□□□ 0.83
SMPD1-210ENST00000534405 MLH1P40692 756 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 STXBP4Q6ZWJ1 553 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 MAP7D3Q8IWC1 876 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 SLC15A3Q8IY34 581 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 ZSWIM2Q8NEG5 633 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 DIS3LQ8TF46 1054 aaKnown RBP20.23■□□□□ 0.83
SMPD1-210ENST00000534405 STMN2Q93045 179 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 TMEM39BQ9GZU3 492 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 K7ENM7 598 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 RAD17O75943 681 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 PAX3P23760 479 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 DSG1Q02413 1049 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.23■□□□□ 0.83
SMPD1-210ENST00000534405 TAF1BQ53T94 588 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms