RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 PAXBP1Q9Y5B6 917 aa4.21□□□□□ -1.74
CSMD3-210ENST00000534172 ATRNL1Q5VV63 1379 aa4.21□□□□□ -1.74
CSMD3-210ENST00000534172 RAD54L2Q9Y4B4 1467 aa4.21□□□□□ -1.74
CSMD3-210ENST00000534172 CFAP69A5D8W1 941 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 CXorf49A8MYA2 514 aaPredicted RBP4.2□□□□□ -1.74
CSMD3-210ENST00000534172 ZNF500O60304 480 aaPredicted RBP4.2□□□□□ -1.74
CSMD3-210ENST00000534172 PRIM2P49643 509 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 RENBPP51606 427 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 PRELPP51888 382 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 AGFG1P52594 562 aaKnown RBP4.2□□□□□ -1.74
CSMD3-210ENST00000534172 NOGQ13253 232 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 CNGB1Q14028 1251 aaPredicted RBP4.2□□□□□ -1.74
CSMD3-210ENST00000534172 CNN3Q15417 329 aaKnown RBP4.2□□□□□ -1.74
CSMD3-210ENST00000534172 ANO6Q4KMQ2 910 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 MFSD14BQ5SR56 506 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 ATXN7L2Q5T6C5 722 aaPredicted RBP4.2□□□□□ -1.74
CSMD3-210ENST00000534172 FTSJ3Q8IY81 847 aaKnown RBP4.2□□□□□ -1.74
CSMD3-210ENST00000534172 KRT78Q8N1N4 520 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 IL17RDQ8NFM7 739 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 OR52N2Q8NGI0 321 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 IFI44Q8TCB0 444 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 DDX17Q92841 729 aaKnown RBP4.2□□□□□ -1.74
CSMD3-210ENST00000534172 RIPOR3Q96MK2 946 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 CGRRF1Q99675 332 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 SELENOOQ9BVL4 669 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 SIK2Q9H0K1 926 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 ARHGEF12Q9NZN5 1544 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 NRBP1Q9UHY1 535 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 SH3BP1Q9Y3L3 701 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 RUSC2Q8N2Y8 1516 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 LRRC7Q96NW7 1537 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 CAPN8A6NHC0 703 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 EXOC5O00471 708 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 TRIM24O15164 1050 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 RRP9O43818 475 aaKnown RBP4.2□□□□□ -1.74
CSMD3-210ENST00000534172 RECQL4O94761 1208 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 PEX11BO96011 259 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 GNAI3P08754 354 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 ACO1P21399 889 aaKnown RBP4.2□□□□□ -1.74
CSMD3-210ENST00000534172 PIK3CBP42338 1070 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 GNAI1P63096 354 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 MXRA7P84157 204 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 TARDBPQ13148 414 aaKnown RBP eCLIP4.2□□□□□ -1.74
CSMD3-210ENST00000534172 ACAP1Q15027 740 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 CCDC70Q6NSX1 233 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 PCGF5Q86SE9 256 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 COL23A1Q86Y22 540 aaPredicted RBP4.2□□□□□ -1.74
CSMD3-210ENST00000534172 CNPY4Q8N129 248 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 OR2C3Q8N628 320 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 KAT5Q92993 513 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 DVL3Q92997 716 aaPredicted RBP4.2□□□□□ -1.74
CSMD3-210ENST00000534172 PACSIN1Q9BY11 444 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 CD248Q9HCU0 757 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 LMBRD1Q9NUN5 540 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 SMPD4Q9NXE4 827 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 PCDHB1Q9Y5F3 818 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 PCDHGB3Q9Y5G1 929 aa4.2□□□□□ -1.74
CSMD3-210ENST00000534172 FANCAO15360 1455 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 AMY1AP04745 511 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 MALP21145 153 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 ACRV1P26436 265 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 HIBADHP31937 336 aaKnown RBP4.19□□□□□ -1.74
CSMD3-210ENST00000534172 MAGEA10P43363 369 aaPredicted RBP4.19□□□□□ -1.74
CSMD3-210ENST00000534172 BTKQ06187 659 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 FGL2Q14314 439 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 KHDC1Q4VXA5 237 aaKnown RBP4.19□□□□□ -1.74
CSMD3-210ENST00000534172 AFMIDQ63HM1 303 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 ARMC6Q6NXE6 501 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 Q6ZSN1 163 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 DAAM2Q86T65 1068 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 FITM2Q8N6M3 262 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 LRTOMTQ8WZ04 291 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 WDR12Q9GZL7 423 aaKnown RBP4.19□□□□□ -1.74
CSMD3-210ENST00000534172 NUP62CLQ9H1M0 184 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 PNPOQ9NVS9 261 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 CFAP97Q9P2B7 532 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 ZDHHC8Q9ULC8 765 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 JAG2Q9Y219 1238 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 DGKBQ9Y6T7 804 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 FRMPD1Q5SYB0 1578 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 ZMYM3Q14202 1370 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 MUSKO15146 869 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 FOXD2O60548 495 aaPredicted RBP4.19□□□□□ -1.74
CSMD3-210ENST00000534172 TYRP14679 529 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 RPL17P18621 184 aaKnown RBP4.19□□□□□ -1.74
CSMD3-210ENST00000534172 C1QTNF8P60827 252 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 BIRC3Q13489 604 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 CCDC174Q6PII3 467 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 FAM43BQ6ZT52 329 aaPredicted RBP4.19□□□□□ -1.74
CSMD3-210ENST00000534172 TEX19Q8NA77 164 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 REPS2Q8NFH8 660 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 BRIX1Q8TDN6 353 aaKnown RBP4.19□□□□□ -1.74
CSMD3-210ENST00000534172 CEP95Q96GE4 821 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 PAGR1Q9BTK6 254 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 NDC1Q9BTX1 674 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 KCNH6Q9H252 994 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 AS3MTQ9HBK9 375 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 SPON1Q9HCB6 807 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 ARFGAP3Q9NP61 516 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms