RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 CCDC62Q6P9F0 684 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 CRELD2Q6UXH1 353 aaPredicted RBP10.32□□□□□ -0.76
CHKA-207ENST00000533728 WDR49Q8IV35 697 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 ZBTB8OSQ8IWT0 167 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 ZNF564Q8TBZ8 553 aaPredicted RBP10.32□□□□□ -0.76
CHKA-207ENST00000533728 MAIP1Q8WWC4 291 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 ZNF516Q92618 1163 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 KAT5Q92993 513 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 RUFY1Q96T51 708 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 GPR20Q99678 358 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 MSTO1Q9BUK6 570 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 MRPL4Q9BYD3 311 aaKnown RBP10.32□□□□□ -0.76
CHKA-207ENST00000533728 IRF2BPLQ9H1B7 796 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 FAM124BQ9H5Z6 455 aaPredicted RBP10.32□□□□□ -0.76
CHKA-207ENST00000533728 TXNRD2Q9NNW7 524 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 VPS18Q9P253 973 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 PCYOX1Q9UHG3 505 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 RASAL2Q9UJF2 1139 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 FAN1Q9Y2M0 1017 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 PCDHA3Q9Y5H8 950 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 ASPMQ8IZT6 3477 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 KMT2EQ8IZD2 1858 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 CNTNAP2Q9UHC6 1331 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 HELZ2Q9BYK8 2649 aaKnown RBP10.31□□□□□ -0.76
CHKA-207ENST00000533728 COL1A2P08123 1366 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 TRIM43BA6NCK2 446 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 PRR23AA6NEV1 266 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 HBP1O60381 514 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 PHF2O75151 1096 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 MMEP08473 750 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 DLATP10515 647 aaKnown RBP10.31□□□□□ -0.76
CHKA-207ENST00000533728 TNNI1P19237 187 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 GGCXP38435 758 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 USP8P40818 1118 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 PIK3CAP42336 1068 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 CARSP49589 748 aaKnown RBP10.31□□□□□ -0.76
CHKA-207ENST00000533728 PEX5P50542 639 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 NLRP11P59045 1033 aaKnown RBP10.31□□□□□ -0.76
CHKA-207ENST00000533728 CENPCQ03188 943 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 CUL2Q13617 745 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 CAPSQ13938 189 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 TFDP1Q14186 410 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 Q3C1V9 767 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 CFAP58Q5T655 872 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 SEL1L2Q5TEA6 688 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 DCAF12L1Q5VU92 463 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 TDRD10Q5VZ19 366 aaKnown RBP10.31□□□□□ -0.76
CHKA-207ENST00000533728 LHX8Q68G74 356 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 ZNF467Q7Z7K2 595 aaPredicted RBP10.31□□□□□ -0.76
CHKA-207ENST00000533728 SLC47A2Q86VL8 602 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 ABRAQ8N0Z2 381 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 UBR7Q8N806 425 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 C12orf50Q8NA57 414 aaPredicted RBP10.31□□□□□ -0.76
CHKA-207ENST00000533728 TATDN2Q93075 761 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 TMEM143Q96AN5 459 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 TRIM43Q96BQ3 446 aaPredicted RBP10.31□□□□□ -0.76
CHKA-207ENST00000533728 FGD4Q96M96 766 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 MMP19Q99542 508 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 NUP85Q9BW27 656 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 SMARCAD1Q9H4L7 1026 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 SLC28A3Q9HAS3 691 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 TOPORSQ9NS56 1045 aaPredicted RBP10.31□□□□□ -0.76
CHKA-207ENST00000533728 RBAKQ9NYW8 714 aaPredicted RBP10.31□□□□□ -0.76
CHKA-207ENST00000533728 MSRAQ9UJ68 235 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 NFU1Q9UMS0 254 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 UTP11Q9Y3A2 253 aaKnown RBP10.31□□□□□ -0.76
CHKA-207ENST00000533728 TELO2Q9Y4R8 837 aa10.31□□□□□ -0.76
CHKA-207ENST00000533728 RBM47A0AV96 593 aaKnown RBP10.3□□□□□ -0.76
CHKA-207ENST00000533728 SRRM3A6NNA2 597 aaPredicted RBP10.3□□□□□ -0.76
CHKA-207ENST00000533728 PROB1E7EW31 1015 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 PODXLO00592 558 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 OGTO15294 1046 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 CLDN3O15551 220 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 MSCO60682 206 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 SHOX2O60902 331 aaPredicted RBP10.3□□□□□ -0.76
CHKA-207ENST00000533728 IGHA2P01877 340 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 FGGP02679 453 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 CLTAP09496 248 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 ACO1P21399 889 aaKnown RBP10.3□□□□□ -0.76
CHKA-207ENST00000533728 PROZP22891 400 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 MAN1A1P33908 653 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 YWHAEP62258 255 aaKnown RBP10.3□□□□□ -0.76
CHKA-207ENST00000533728 CCNA1P78396 465 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 SKOR1P84550 965 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 SP4Q02446 784 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 MCL1Q07820 350 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 TTLL4Q14679 1199 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 RAB30Q15771 203 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 MAPK6Q16659 721 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 KYAT1Q16773 422 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 FAM187BQ17R55 369 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 ZNF484Q5JVG2 852 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 PHF13Q86YI8 300 aaPredicted RBP10.3□□□□□ -0.76
CHKA-207ENST00000533728 IFNLR1Q8IU57 520 aaPredicted RBP10.3□□□□□ -0.76
CHKA-207ENST00000533728 KLHL7Q8IXQ5 586 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 GSPT2Q8IYD1 628 aaKnown RBP10.3□□□□□ -0.76
CHKA-207ENST00000533728 MCOLN2Q8IZK6 566 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 GPRC5AQ8NFJ5 357 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 FAM76AQ8TAV0 307 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 TRIB2Q92519 343 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms