RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 C18orf25Q96B23 403 aaPredicted RBP18.56■□□□□ 0.56
CTSB-229ENST00000533572 BORCS6Q96GS4 357 aa18.56■□□□□ 0.56
CTSB-229ENST00000533572 ANKRD36BP1Q96IX9 119 aa18.56■□□□□ 0.56
CTSB-229ENST00000533572 NECTIN4Q96NY8 510 aa18.56■□□□□ 0.56
CTSB-229ENST00000533572 PHF7Q9BWX1 381 aaPredicted RBP18.56■□□□□ 0.56
CTSB-229ENST00000533572 S1PR5Q9H228 398 aa18.56■□□□□ 0.56
CTSB-229ENST00000533572 ADAM7Q9H2U9 754 aa18.56■□□□□ 0.56
CTSB-229ENST00000533572 CBX8Q9HC52 389 aa18.56■□□□□ 0.56
CTSB-229ENST00000533572 TMEM191BP0C7N4 346 aa18.55■□□□□ 0.56
CTSB-229ENST00000533572 PAX3P23760 479 aa18.55■□□□□ 0.56
CTSB-229ENST00000533572 NCAPHQ15003 741 aa18.55■□□□□ 0.56
CTSB-229ENST00000533572 IQCB1Q15051 598 aa18.55■□□□□ 0.56
CTSB-229ENST00000533572 DUOXA2Q1HG44 320 aa18.55■□□□□ 0.56
CTSB-229ENST00000533572 ATAT1Q5SQI0 421 aa18.55■□□□□ 0.56
CTSB-229ENST00000533572 PRSS55Q6UWB4 352 aaPredicted RBP18.55■□□□□ 0.56
CTSB-229ENST00000533572 PALB2Q86YC2 1186 aa18.55■□□□□ 0.56
CTSB-229ENST00000533572 DHX40Q8IX18 779 aaKnown RBP18.55■□□□□ 0.56
CTSB-229ENST00000533572 C12orf76Q8N812 135 aaPredicted RBP18.55■□□□□ 0.56
CTSB-229ENST00000533572 CCDC127Q96BQ5 260 aa18.55■□□□□ 0.56
CTSB-229ENST00000533572 EEF2KMTQ96G04 330 aa18.55■□□□□ 0.56
CTSB-229ENST00000533572 CNOT6LQ96LI5 555 aaKnown RBP18.55■□□□□ 0.56
CTSB-229ENST00000533572 PDE11AQ9HCR9 933 aa18.55■□□□□ 0.56
CTSB-229ENST00000533572 MAN1C1Q9NR34 630 aa18.55■□□□□ 0.56
CTSB-229ENST00000533572 INTS13Q9NVM9 706 aa18.55■□□□□ 0.56
CTSB-229ENST00000533572 FANCLQ9NW38 375 aa18.55■□□□□ 0.56
CTSB-229ENST00000533572 R3HCC1Q9Y3T6 440 aaKnown RBP18.55■□□□□ 0.56
CTSB-229ENST00000533572 KCNJ18B7U540 433 aa18.54■□□□□ 0.56
CTSB-229ENST00000533572 TULP1O00294 542 aaPredicted RBP18.54■□□□□ 0.56
CTSB-229ENST00000533572 N4BP1O75113 896 aaKnown RBP18.54■□□□□ 0.56
CTSB-229ENST00000533572 TNNC2P02585 160 aa18.54■□□□□ 0.56
CTSB-229ENST00000533572 DLATP10515 647 aaKnown RBP18.54■□□□□ 0.56
CTSB-229ENST00000533572 RPL17P18621 184 aaKnown RBP18.54■□□□□ 0.56
CTSB-229ENST00000533572 COL9A1P20849 921 aa18.54■□□□□ 0.56
CTSB-229ENST00000533572 CDK11BP21127 795 aaKnown RBP18.54■□□□□ 0.56
CTSB-229ENST00000533572 BRCC3P46736 316 aa18.54■□□□□ 0.56
CTSB-229ENST00000533572 KCNJ12Q14500 433 aa18.54■□□□□ 0.56
CTSB-229ENST00000533572 ZBTB6Q15916 424 aa18.54■□□□□ 0.56
CTSB-229ENST00000533572 CDKAL1Q5VV42 579 aa18.54■□□□□ 0.56
CTSB-229ENST00000533572 JADE1Q6IE81 842 aa18.54■□□□□ 0.56
CTSB-229ENST00000533572 TMC5Q6UXY8 1006 aa18.54■□□□□ 0.56
CTSB-229ENST00000533572 TRIM59Q8IWR1 403 aa18.54■□□□□ 0.56
CTSB-229ENST00000533572 RPGRIP1Q96KN7 1286 aa18.54■□□□□ 0.56
CTSB-229ENST00000533572 TUBGCP4Q9UGJ1 667 aa18.54■□□□□ 0.56
CTSB-229ENST00000533572 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.54■□□□□ 0.56
CTSB-229ENST00000533572 C19orf67A6NJJ6 358 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 I3L4J1 428 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 MEFVO15553 781 aaPredicted RBP18.53■□□□□ 0.56
CTSB-229ENST00000533572 C1RP00736 705 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 FGFR3P22607 806 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 MTIF2P46199 727 aaKnown RBP18.53■□□□□ 0.56
CTSB-229ENST00000533572 TFAMQ00059 246 aaKnown RBP18.53■□□□□ 0.56
CTSB-229ENST00000533572 CETN1Q12798 172 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 TCP11X2Q5H9J9 407 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 TCERG1LQ5VWI1 586 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 ANKS3Q6ZW76 656 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 IRF2BP1Q8IU81 584 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 CREBRFQ8IUR6 639 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 C3orf58Q8NDZ4 430 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 PLEKHA4Q9H4M7 779 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 CD320Q9NPF0 282 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 SAMSN1Q9NSI8 373 aaKnown RBP18.53■□□□□ 0.56
CTSB-229ENST00000533572 ITGA11Q9UKX5 1188 aa18.53■□□□□ 0.56
CTSB-229ENST00000533572 LRRIQ3A6PVS8 624 aaPredicted RBP18.52■□□□□ 0.56
CTSB-229ENST00000533572 P4HA2O15460 535 aa18.52■□□□□ 0.56
CTSB-229ENST00000533572 NFICP08651 508 aa18.52■□□□□ 0.56
CTSB-229ENST00000533572 ZNF18P17022 549 aa18.52■□□□□ 0.56
CTSB-229ENST00000533572 TKTP29401 623 aaKnown RBP18.52■□□□□ 0.56
CTSB-229ENST00000533572 LRPAP1P30533 357 aa18.52■□□□□ 0.56
CTSB-229ENST00000533572 MAN2A1Q16706 1144 aa18.52■□□□□ 0.56
CTSB-229ENST00000533572 DCAF17Q5H9S7 520 aaPredicted RBP18.52■□□□□ 0.56
CTSB-229ENST00000533572 LIN9Q5TKA1 542 aa18.52■□□□□ 0.56
CTSB-229ENST00000533572 LNX1Q8TBB1 728 aaPredicted RBP18.52■□□□□ 0.56
CTSB-229ENST00000533572 HDAC7Q8WUI4 952 aa18.52■□□□□ 0.56
CTSB-229ENST00000533572 SLC35C1Q96A29 364 aa18.52■□□□□ 0.56
CTSB-229ENST00000533572 TMEM8AQ9HCN3 771 aa18.52■□□□□ 0.56
CTSB-229ENST00000533572 NR2E1Q9Y466 385 aa18.52■□□□□ 0.56
CTSB-229ENST00000533572 PDCD11Q14690 1871 aaKnown RBP18.52■□□□□ 0.55
CTSB-229ENST00000533572 SYN3O14994 580 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 PMM2O15305 246 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 TGM5O43548 720 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 AFPP02771 609 aaKnown RBP18.51■□□□□ 0.55
CTSB-229ENST00000533572 WEE2P0C1S8 567 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 SPATA31D3P0C874 917 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 KRT39Q6A163 491 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 SPATA31D4Q6ZUB0 917 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 LUZP1Q86V48 1076 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 EFCAB13Q8IY85 973 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 KREMEN2Q8NCW0 462 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 APPL2Q8NEU8 664 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 TUBGCP2Q9BSJ2 902 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 DPP3Q9NY33 737 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 MTRRQ9UBK8 725 aa18.51■□□□□ 0.55
CTSB-229ENST00000533572 LRRC10BA6NIK2 292 aa18.5■□□□□ 0.55
CTSB-229ENST00000533572 H7C4K7 107 aa18.5■□□□□ 0.55
CTSB-229ENST00000533572 PHACTR2O75167 634 aa18.5■□□□□ 0.55
CTSB-229ENST00000533572 ALADP13716 330 aa18.5■□□□□ 0.55
CTSB-229ENST00000533572 SP100P23497 879 aaPredicted RBP18.5■□□□□ 0.55
CTSB-229ENST00000533572 PNPLA4P41247 253 aa18.5■□□□□ 0.55
CTSB-229ENST00000533572 MXI1P50539 228 aa18.5■□□□□ 0.55
CTSB-229ENST00000533572 RBP5P82980 135 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms