RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 ATP9BO43861 1147 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 CYP11B1P15538 503 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 RARRES1P49788 294 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 PPP1R2P3Q6NXS1 205 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 RSPH3Q86UC2 560 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 PHC3Q8NDX5 983 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 STAMBPL1Q96FJ0 436 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 GMCL1Q96IK5 515 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 MMTAG2Q9BU76 263 aaKnown RBP12.87□□□□□ -0.35
BDNF-218ENST00000533246 TRABDQ9H4I3 376 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 DDX20Q9UHI6 824 aaKnown RBP12.87□□□□□ -0.35
BDNF-218ENST00000533246 DDX3XO00571 662 aaKnown RBP eCLIP12.87□□□□□ -0.35
BDNF-218ENST00000533246 VIL1P09327 827 aaKnown RBP12.87□□□□□ -0.35
BDNF-218ENST00000533246 EFNA5P52803 228 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 DGKZQ13574 1117 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 PRPSAP1Q14558 356 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 CBWD6Q4V339 395 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 MDH1BQ5I0G3 518 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 CBWD3Q5JTY5 395 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 CBWD5Q5RIA9 395 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 HEATR6Q6AI08 1181 aaKnown RBP12.87□□□□□ -0.35
BDNF-218ENST00000533246 EFCAB12Q6NXP0 572 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 PPWD1Q96BP3 646 aaKnown RBP12.87□□□□□ -0.35
BDNF-218ENST00000533246 MTMR12Q9C0I1 747 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 NDEL1Q9GZM8 345 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 NOD2Q9HC29 1040 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 CASP2P42575 452 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 DACT2Q5SW24 774 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 METTL23Q86XA0 190 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 CCNYL1Q8N7R7 359 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 EPS8L3Q8TE67 593 aaKnown RBP12.86□□□□□ -0.35
BDNF-218ENST00000533246 PPP1R36Q96LQ0 422 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 ACAP3Q96P50 834 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 SENP7Q9BQF6 1050 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 C2orf40Q9H1Z8 148 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 TXLNGQ9NUQ3 528 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 DLGAP2Q9P1A6 1054 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 PNMA3Q9UL41 463 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 PIN4Q9Y237 131 aaKnown RBP12.86□□□□□ -0.35
BDNF-218ENST00000533246 SPATA31A6Q5VVP1 1343 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 FDX1P10109 184 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 PPATQ06203 517 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 AADACL2Q6P093 401 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 TRIM72Q6ZMU5 477 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 EMC1Q8N766 993 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 PRPF31Q8WWY3 499 aaKnown RBP12.86□□□□□ -0.35
BDNF-218ENST00000533246 CCDC124Q96CT7 223 aaKnown RBP12.86□□□□□ -0.35
BDNF-218ENST00000533246 FAM163AQ96GL9 167 aaPredicted RBP12.86□□□□□ -0.35
BDNF-218ENST00000533246 XPO6Q96QU8 1125 aaKnown RBP12.86□□□□□ -0.35
BDNF-218ENST00000533246 FGFBP2Q9BYJ0 223 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 CYP26B1Q9NR63 512 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 RNF19AQ9NV58 838 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 KCND2Q9NZV8 630 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 FAM198AQ9UFP1 575 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 GJB6O95452 261 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 TCF7P36402 384 aaPredicted RBP12.86□□□□□ -0.35
BDNF-218ENST00000533246 TMED10P49755 219 aaKnown RBP12.86□□□□□ -0.35
BDNF-218ENST00000533246 ROR1Q01973 937 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 MAPK7Q13164 816 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 ECM1Q16610 540 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 STYK1Q6J9G0 422 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 KIAA1841Q6NSI8 718 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 RNF135Q8IUD6 432 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 CREG2Q8IUH2 290 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 ATP8B4Q8TF62 1192 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 SEMA4AQ9H3S1 761 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 CYP4F11Q9HBI6 524 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 GALNT8Q9NY28 637 aa12.86□□□□□ -0.35
BDNF-218ENST00000533246 SMAPO00193 183 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 LPXNO60711 386 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 CDH16O75309 829 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 TMCC1O94876 653 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 COILP38432 576 aaPredicted RBP12.85□□□□□ -0.35
BDNF-218ENST00000533246 RAB27AP51159 221 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 POU5F1BQ06416 359 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 THOC5Q13769 683 aaKnown RBP12.85□□□□□ -0.35
BDNF-218ENST00000533246 C3orf62Q6ZUJ4 267 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 ATP11CQ8NB49 1132 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 BEST2Q8NFU1 509 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 SPATA18Q8TC71 538 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 OPTNQ96CV9 577 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 DRC3Q9H069 523 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 GTF3C4Q9UKN8 822 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 IGSF9BQ9UPX0 1349 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 SIGLEC1Q9BZZ2 1709 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 KRT38O76015 456 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 IMPDH2P12268 514 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 TMEM154Q6P9G4 183 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 GSDMBQ8TAX9 411 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 ZBTB45Q96K62 511 aaPredicted RBP12.85□□□□□ -0.35
BDNF-218ENST00000533246 EPAS1Q99814 870 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 ZSWIM1Q9BR11 485 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 FBXO9Q9UK97 447 aaPredicted RBP12.85□□□□□ -0.35
BDNF-218ENST00000533246 ABT1Q9ULW3 272 aaKnown RBP12.85□□□□□ -0.35
BDNF-218ENST00000533246 ITM2BQ9Y287 266 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 KDM4FA0A1W2PPD8 638 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 WNT10BO00744 389 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 MEIS2O14770 477 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 FOXD4Q12950 439 aaPredicted RBP12.85□□□□□ -0.35
BDNF-218ENST00000533246 DNAJC3Q13217 504 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms