RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 PPEF2O14830 753 aa19.8■□□□□ 0.76
SMPD1-208ENST00000533123 ASS1P00966 412 aaKnown RBP19.8■□□□□ 0.76
SMPD1-208ENST00000533123 NOP14P78316 857 aaKnown RBP19.8■□□□□ 0.76
SMPD1-208ENST00000533123 SGSM1Q2NKQ1 1148 aa19.8■□□□□ 0.76
SMPD1-208ENST00000533123 GLB1LQ6UWU2 654 aa19.8■□□□□ 0.76
SMPD1-208ENST00000533123 SECISBP2LQ93073 1101 aaKnown RBP19.8■□□□□ 0.76
SMPD1-208ENST00000533123 NAPGQ99747 312 aaPredicted RBP19.8■□□□□ 0.76
SMPD1-208ENST00000533123 IMPG2Q9BZV3 1241 aa19.8■□□□□ 0.76
SMPD1-208ENST00000533123 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.8■□□□□ 0.76
SMPD1-208ENST00000533123 LRFN2Q9ULH4 789 aa19.8■□□□□ 0.76
SMPD1-208ENST00000533123 NUB1Q9Y5A7 615 aa19.8■□□□□ 0.76
SMPD1-208ENST00000533123 CAPN6Q9Y6Q1 641 aa19.8■□□□□ 0.76
SMPD1-208ENST00000533123 V9GYY5 206 aaPredicted RBP19.8■□□□□ 0.76
SMPD1-208ENST00000533123 ENC1O14682 589 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 PJA2O43164 708 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 XPOTO43592 962 aaKnown RBP19.79■□□□□ 0.76
SMPD1-208ENST00000533123 ZC3H11AO75152 810 aaKnown RBP eCLIP19.79■□□□□ 0.76
SMPD1-208ENST00000533123 MOCS3O95396 460 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 RBP5P82980 135 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 CBX1P83916 185 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 NAB2Q15742 525 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 CRIPAKQ8N1N5 446 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 DPF3Q92784 378 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 ZMYND8Q9ULU4 1186 aaPredicted RBP19.79■□□□□ 0.76
SMPD1-208ENST00000533123 DAAM1Q9Y4D1 1078 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 SCN1AP35498 2009 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 FAM170AA1A519 330 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 DDX3XO00571 662 aaKnown RBP eCLIP19.79■□□□□ 0.761e-11■■■■■ 63
SMPD1-208ENST00000533123 UPP2O95045 317 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 ZNF699Q32M78 642 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 C9orf57Q5W0N0 161 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 C16orf59Q7L2K0 433 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 PDCL2Q8N4E4 241 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 LNX1Q8TBB1 728 aaPredicted RBP19.79■□□□□ 0.76
SMPD1-208ENST00000533123 IL23AQ9NPF7 189 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 SLC38A7Q9NVC3 462 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 NAGPAQ9UK23 515 aa19.79■□□□□ 0.76
SMPD1-208ENST00000533123 CEP290O15078 2479 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 ABHD14A-ACY1A0A1B0GW23 586 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 CYP3A5P20815 502 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 GATMP50440 423 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 OTOP2Q7RTS6 562 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 HPDLQ96IR7 371 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 CARD6Q9BX69 1037 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 PFKMP08237 780 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 USP8P40818 1118 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 FPGSQ05932 587 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 WDR72Q3MJ13 1102 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 GLYCTKQ8IVS8 523 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 ABI1Q8IZP0 508 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 TNS4Q8IZW8 715 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 RABGGTAQ92696 567 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 SYT11Q9BT88 431 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 NXF1Q9UBU9 619 aaKnown RBP19.78■□□□□ 0.76
SMPD1-208ENST00000533123 NENFQ9UMX5 172 aa19.78■□□□□ 0.76
SMPD1-208ENST00000533123 TDRD15B5MCY1 1934 aaKnown RBP19.77■□□□□ 0.76
SMPD1-208ENST00000533123 ANO9A1A5B4 782 aa19.77■□□□□ 0.76
SMPD1-208ENST00000533123 CASTOR2A6NHX0 329 aa19.77■□□□□ 0.76
SMPD1-208ENST00000533123 ATP1A1P05023 1023 aaKnown RBP19.77■□□□□ 0.76
SMPD1-208ENST00000533123 NOMO2Q5JPE7 1267 aa19.77■□□□□ 0.76
SMPD1-208ENST00000533123 ALKBH5Q6P6C2 394 aaKnown RBP19.77■□□□□ 0.76
SMPD1-208ENST00000533123 SLC20A1Q8WUM9 679 aa19.77■□□□□ 0.76
SMPD1-208ENST00000533123 PIRO00625 290 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 INPPL1O15357 1258 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 BUB1O43683 1085 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 GRIK3Q13003 919 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 TMCO2Q7Z6W1 182 aaPredicted RBP19.76■□□□□ 0.75
SMPD1-208ENST00000533123 VPS36Q86VN1 386 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 NPAS4Q8IUM7 802 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 PAAF1Q9BRP4 392 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 ACP6Q9NPH0 428 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 IGFBP6P24592 240 aaPredicted RBP19.76■□□□□ 0.75
SMPD1-208ENST00000533123 ATICP31939 592 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 CLCNKBP51801 687 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 EPHB4P54760 987 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 MFAP3P55082 362 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 DEFB103AP81534 67 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 GCNT1Q02742 428 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 PPIGQ13427 754 aaKnown RBP eCLIP19.76■□□□□ 0.75
SMPD1-208ENST00000533123 BMS1Q14692 1282 aaKnown RBP19.76■□□□□ 0.75
SMPD1-208ENST00000533123 SLC30A5Q8TAD4 765 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 URGCPQ8TCY9 931 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 TAF4BQ92750 862 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 LUC7LQ9NQ29 371 aaKnown RBP19.76■□□□□ 0.75
SMPD1-208ENST00000533123 POLIQ9UNA4 740 aa19.76■□□□□ 0.75
SMPD1-208ENST00000533123 RANBP2P49792 3224 aaKnown RBP19.76■□□□□ 0.75
SMPD1-208ENST00000533123 ANXA13P27216 316 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 LRPAP1P30533 357 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 AMPD2Q01433 879 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 CUL2Q13617 745 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 ZNF667Q5HYK9 610 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 SCARA5Q6ZMJ2 495 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 ZNF365Q70YC5 407 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 PALB2Q86YC2 1186 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 ZNF280BQ86YH2 543 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 SHC3Q92529 594 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 CASD1Q96PB1 797 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 TBC1D13Q9NVG8 400 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 DDHD2O94830 711 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 WDR5P61964 334 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms