RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 VARS2Q5ST30 1063 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 ANKS3Q6ZW76 656 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 TOP6BLQ8N6T0 577 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 LNX1Q8TBB1 728 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 FAM200AQ8TCP9 573 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 AUTS2Q8WXX7 1259 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 PIK3R5Q8WYR1 880 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 GBF1Q92538 1859 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 MMS19Q96T76 1030 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 EMILIN2Q9BXX0 1053 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 XYLT2Q9H1B5 865 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 TLE6Q9H808 572 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 VRTNQ9H8Y1 702 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 NXF1Q9UBU9 619 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 COQ4Q9Y3A0 265 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 TIMM13Q9Y5L4 95 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 IRAK3Q9Y616 596 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 MTCH2Q9Y6C9 303 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 CITO14578 2027 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 TDRD15B5MCY1 1934 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 GOLGA6L3A6NEY3 463 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 C2orf71A6NGG8 1288 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 HIDE1A8MVS5 230 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 PES1O00541 588 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 OAZ2O95190 189 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 ASS1P00966 412 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 CYP11A1P05108 521 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 FAM163BP0C2L3 166 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 FOSL2P15408 326 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 CREMQ03060 361 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 MRPL58Q14197 206 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 WSCD1Q658N2 575 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 PRSS55Q6UWB4 352 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 LUZP1Q86V48 1076 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 THEM5Q8N1Q8 247 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 TMEM86AQ8N2M4 240 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 EHBP1Q8NDI1 1231 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 SEMA4DQ92854 862 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 GUCD1Q96NT3 240 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 PI4K2AQ9BTU6 479 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 OXCT2Q9BYC2 517 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 VPS16Q9H269 839 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 NDST4Q9H3R1 872 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 NSUN3Q9H649 340 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 RXFP1Q9HBX9 757 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 FNIP2Q9P278 1114 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 BACE2Q9Y5Z0 518 aa12.06□□□□□ -0.48
TRAPPC4-211ENST00000533012 CHD7Q9P2D1 2997 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 LRRC10BA6NIK2 292 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 CNPP09543 421 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 ZNF18P17022 549 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 KLRC2P26717 231 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 LHX1P48742 406 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 KRT31Q15323 416 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 PSMD5Q16401 504 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 SOWAHAQ2M3V2 549 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 CTXN3Q4LDR2 81 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 OVOS1Q6IE37 1185 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 ZNF280DQ6N043 979 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 GBP6Q6ZN66 633 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 RBM23Q86U06 439 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 PPFIBP1Q86W92 1011 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 PDCL2Q8N4E4 241 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 SPATA18Q8TC71 538 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 FAXDC2Q96IV6 333 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 KLHL5Q96PQ7 755 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.05□□□□□ -0.481e-22■■■■■ 419.2
TRAPPC4-211ENST00000533012 TAB2Q9NYJ8 693 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 LIMA1Q9UHB6 759 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 PCDHGC5Q9Y5F6 944 aa12.05□□□□□ -0.48
TRAPPC4-211ENST00000533012 RALGAPA2Q2PPJ7 1873 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 GTPBP10A4D1E9 387 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 PER2O15055 1255 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 TEX28O15482 410 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 TACC1O75410 805 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 ADH1AP07327 375 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 GNL1P36915 607 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 NDUFV1P49821 464 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 NOP14P78316 857 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 EXOC3L4Q17RC7 722 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 TCEAL5Q5H9L2 206 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 MIIPQ5JXC2 388 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 SPOPLQ6IQ16 392 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 ADGRD2Q7Z7M1 963 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 ADGRF2Q8IZF7 708 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 MICALL1Q8N3F8 863 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 ELMO3Q96BJ8 720 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 CDCA3Q99618 268 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 CLSTN3Q9BQT9 956 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 HSD3B7Q9H2F3 369 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 SNX25Q9H3E2 840 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 IGFLR1Q9H665 355 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 CYP3A43Q9HB55 503 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 DDX43Q9NXZ2 648 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 MTRRQ9UBK8 725 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 L1RE1Q9UN81 338 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 POLIQ9UNA4 740 aa12.04□□□□□ -0.48
TRAPPC4-211ENST00000533012 FSD2A1L4K1 749 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 OR6C75A6NL08 312 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms