RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 SLC27A5Q9Y2P5 690 aa18.55■□□□□ 0.56
RPUSD4-207ENST00000532800 MRPS17Q9Y2R5 130 aaKnown RBP18.55■□□□□ 0.56
RPUSD4-207ENST00000532800 SCN1AP35498 2009 aa18.55■□□□□ 0.56
RPUSD4-207ENST00000532800 CACNA1AO00555 2505 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 A0A1W2PRU2 124 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 MTMR11A4FU01 709 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 OR6C75A6NL08 312 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 ANKRD63C9JTQ0 380 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 NCAM2O15394 837 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 SOAT2O75908 522 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 KRT18P05783 430 aaKnown RBP18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 PSMC3P17980 439 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 LILRA4P59901 499 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 MTAPQ13126 283 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 GPR17Q13304 367 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 SF3A1Q15459 793 aaKnown RBP18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 STXBP5Q5T5C0 1151 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 ERMP1Q7Z2K6 904 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 ATAD1Q8NBU5 361 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 RASSF8Q8NHQ8 419 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 DEPDC1BQ8WUY9 529 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 IRF7Q92985 503 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 SENP8Q96LD8 212 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 IKZF4Q9H2S9 585 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 SLITRK6Q9H5Y7 841 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 TRPV4Q9HBA0 871 aa18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 PRMT8Q9NR22 394 aaPredicted RBP18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.54■□□□□ 0.56
RPUSD4-207ENST00000532800 HEPACAM2A8MVW5 462 aa18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 TBCAO75347 108 aaKnown RBP18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 TYMPP19971 482 aa18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 LONP1P36776 959 aaKnown RBP18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 ACOT2P49753 483 aa18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 CDR1P51861 262 aa18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 ZC2HC1CQ53FD0 456 aaPredicted RBP18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 C9orf57Q5W0N0 161 aa18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 CENPPQ6IPU0 288 aa18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 GPIHBP1Q8IV16 184 aa18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 ZBTB44Q8NCP5 570 aa18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 OXCT2Q9BYC2 517 aaPredicted RBP18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 PCDHGA2Q9Y5H1 932 aa18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 PIAS3Q9Y6X2 628 aa18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 TCHHQ07283 1943 aa18.53■□□□□ 0.56
RPUSD4-207ENST00000532800 NUP210Q8TEM1 1887 aaPredicted RBP18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 CEP250Q9BV73 2442 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 ARNTLO00327 626 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 MAN2B1O00754 1011 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 ODC1P11926 461 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 MCM2P49736 904 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 EPHB3P54753 998 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 GTF2BQ00403 316 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 PLD1Q13393 1074 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 MYBPC2Q14324 1141 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 TMEM132DQ14C87 1099 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 USP49Q70CQ1 688 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 BRAPQ7Z569 592 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 MFSD6LQ8IWD5 586 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 OR10T2Q8NGX3 314 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 FAM3CQ92520 227 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 LARP4BQ92615 738 aaKnown RBP18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 NELL1Q92832 810 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 CHRDQ9H2X0 955 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 TRPV5Q9NQA5 729 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 ZSCAN32Q9NX65 697 aa18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.52■□□□□ 0.56
RPUSD4-207ENST00000532800 ANO9A1A5B4 782 aa18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 PIRO00625 290 aa18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 ZNF263O14978 683 aa18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 LILRB5O75023 590 aa18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 BMP15O95972 392 aa18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 SCP2P22307 547 aa18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 ALDH1A3P47895 512 aa18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 GAREM2Q75VX8 874 aa18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 CD302Q8IX05 232 aa18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 ATRIPQ8WXE1 791 aa18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 EPSTI1Q96J88 318 aa18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 TSPAN18Q96SJ8 248 aa18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 MKNK1Q9BUB5 465 aa18.51■□□□□ 0.55
RPUSD4-207ENST00000532800 VPS37CA5D8V6 355 aaPredicted RBP18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 CCNE1P24864 410 aa18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 ADALQ6DHV7 355 aa18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 DNAJB7Q7Z6W7 309 aaPredicted RBP18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 SFR1Q86XK3 245 aa18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 PSMG2Q969U7 264 aa18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 LPIN3Q9BQK8 851 aa18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 CCSER1Q9C0I3 900 aa18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 GPR88Q9GZN0 384 aa18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 LMAN1LQ9HAT1 526 aa18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 UPF2Q9HAU5 1272 aaKnown RBP18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 NCDNQ9UBB6 729 aa18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 SMG5Q9UPR3 1016 aaKnown RBP18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 CLIC4Q9Y696 253 aa18.5■□□□□ 0.55
RPUSD4-207ENST00000532800 CYP11A1P05108 521 aa18.49■□□□□ 0.55
RPUSD4-207ENST00000532800 TDGF1P13385 188 aa18.49■□□□□ 0.55
RPUSD4-207ENST00000532800 GABRR2P28476 465 aa18.49■□□□□ 0.55
RPUSD4-207ENST00000532800 SOX9P48436 509 aa18.49■□□□□ 0.55
RPUSD4-207ENST00000532800 SLC39A12Q504Y0 691 aa18.49■□□□□ 0.55
RPUSD4-207ENST00000532800 ARMCX5Q6P1M9 558 aa18.49■□□□□ 0.55
RPUSD4-207ENST00000532800 DYMQ7RTS9 669 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms