RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CYP4A22Q5TCH4 519 aa18.61■□□□□ 0.57
PHRF1-204ENST00000532550 MTSS1LQ765P7 747 aa18.61■□□□□ 0.57
PHRF1-204ENST00000532550 LEO1Q8WVC0 666 aaPredicted RBP18.61■□□□□ 0.57
PHRF1-204ENST00000532550 PGLYRP2Q96PD5 576 aa18.61■□□□□ 0.57
PHRF1-204ENST00000532550 AVENQ9NQS1 362 aaPredicted RBP18.61■□□□□ 0.57
PHRF1-204ENST00000532550 SERTAD1Q9UHV2 236 aa18.61■□□□□ 0.57
PHRF1-204ENST00000532550 NUMBLQ9Y6R0 609 aa18.61■□□□□ 0.57
PHRF1-204ENST00000532550 NOTCH4Q99466 2003 aa18.61■□□□□ 0.57
PHRF1-204ENST00000532550 KPNA7A9QM74 516 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 ZNF197O14709 1029 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 CYP11A1P05108 521 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 CFHP08603 1231 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 SLFN14P0C7P3 912 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 CMA1P23946 247 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 PNPLA4P41247 253 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 TWF1Q12792 350 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 CUL4BQ13620 913 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 BECN1Q14457 450 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 SURF1Q15526 300 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 IER5LQ5T953 404 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 PARM1Q6UWI2 310 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 EPM2AIP1Q7L775 607 aaPredicted RBP18.6■□□□□ 0.57
PHRF1-204ENST00000532550 CSGALNACT2Q8N6G5 542 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 ST13P5Q8NFI4 369 aaPredicted RBP18.6■□□□□ 0.57
PHRF1-204ENST00000532550 ING5Q8WYH8 240 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 ZNF560Q96MR9 790 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 KIAA1586Q9HCI6 787 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 PDE11AQ9HCR9 933 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 WNT16Q9UBV4 365 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 AGAP1Q9UPQ3 857 aa18.6■□□□□ 0.57
PHRF1-204ENST00000532550 R3HCC1Q9Y3T6 440 aaKnown RBP18.6■□□□□ 0.57
PHRF1-204ENST00000532550 TCHHQ07283 1943 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 A0A1B0GVL5 298 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 ITGB3P05106 788 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 SRFP11831 508 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 POLR2BP30876 1174 aaKnown RBP18.59■□□□□ 0.57
PHRF1-204ENST00000532550 HOXD13P35453 343 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 ALDH1A3P47895 512 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 VCPP55072 806 aaKnown RBP18.59■□□□□ 0.57
PHRF1-204ENST00000532550 WNT7BP56706 349 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 SNRPFP62306 86 aaKnown RBP18.59■□□□□ 0.57
PHRF1-204ENST00000532550 DUSP4Q13115 394 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 PLD1Q13393 1074 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 PDZD4Q76G19 769 aaPredicted RBP18.59■□□□□ 0.57
PHRF1-204ENST00000532550 NPAS3Q8IXF0 933 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 FLCNQ8NFG4 579 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 FGF14Q92915 247 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 MCRS1Q96EZ8 462 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 BORCS6Q96GS4 357 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 SLC39A2Q9NP94 309 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 GDE1Q9NZC3 331 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 HSPBP1Q9NZL4 362 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 CEP72Q9P209 647 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 USP25Q9UHP3 1055 aa18.59■□□□□ 0.57
PHRF1-204ENST00000532550 UBE4BO95155 1302 aa18.58■□□□□ 0.57
PHRF1-204ENST00000532550 STK25O00506 426 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 KRT19P08727 400 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 TMEM191BP0C7N4 346 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 EPHB3P54753 998 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 RBP5P82980 135 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 EHHADHQ08426 723 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 SLC5A9Q2M3M2 681 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 ASTLQ6HA08 431 aaPredicted RBP18.58■□□□□ 0.56
PHRF1-204ENST00000532550 CENPPQ6IPU0 288 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 HS2ST1Q7LGA3 356 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 NELFCDQ8IXH7 590 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 GRAMD1CQ8IYS0 662 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 SIX5Q8N196 739 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 C1orf127Q8N9H9 656 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 LEMD2Q8NC56 503 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 SCFD1Q8WVM8 642 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 PAGE5Q96GU1 130 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 ANKRD36BP1Q96IX9 119 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 CHAMP1Q96JM3 812 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 RPP25Q9BUL9 199 aaKnown RBP18.58■□□□□ 0.56
PHRF1-204ENST00000532550 SCAND2PQ9GZW5 306 aaPredicted RBP18.58■□□□□ 0.56
PHRF1-204ENST00000532550 ITGA11Q9UKX5 1188 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 SLC27A5Q9Y2P5 690 aa18.58■□□□□ 0.56
PHRF1-204ENST00000532550 CLIC2O15247 247 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 TGFB1I1O43294 461 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 ACTN4O43707 911 aaKnown RBP18.57■□□□□ 0.56
PHRF1-204ENST00000532550 MICAL2O94851 1124 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 PFKFB1P16118 471 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 CLCN5P51795 746 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 NUBP1P53384 320 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 SLC39A12Q504Y0 691 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 WSCD1Q658N2 575 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 CBWD2Q8IUF1 395 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 RDH13Q8NBN7 331 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 ATAD1Q8NBU5 361 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 GPR152Q8TDT2 470 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 TMEM209Q96SK2 561 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 ASAH2Q9NR71 780 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 AGPAT3Q9NRZ7 376 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 YIPF1Q9Y548 306 aa18.57■□□□□ 0.56
PHRF1-204ENST00000532550 MTMR11A4FU01 709 aa18.56■□□□□ 0.56
PHRF1-204ENST00000532550 HUS1O60921 280 aa18.56■□□□□ 0.56
PHRF1-204ENST00000532550 VNN2O95498 520 aa18.56■□□□□ 0.56
PHRF1-204ENST00000532550 TNNC2P02585 160 aa18.56■□□□□ 0.56
PHRF1-204ENST00000532550 MYL4P12829 197 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms