RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 RPL17P18621 184 aaKnown RBP8.61□□□□□ -1.03
TRIM49-202ENST00000532501 MTIF2P46199 727 aaKnown RBP8.61□□□□□ -1.03
TRIM49-202ENST00000532501 MXI1P50539 228 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 COPB1P53618 953 aaKnown RBP8.61□□□□□ -1.03
TRIM49-202ENST00000532501 LILRA4P59901 499 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 TPM4P67936 248 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 RBM10P98175 930 aaKnown RBP8.61□□□□□ -1.03
TRIM49-202ENST00000532501 KCNMA1Q12791 1236 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 KCNH2Q12809 1159 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 BIRC3Q13489 604 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 NCOA4Q13772 614 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 TPD52L1Q16890 204 aaPredicted RBP8.61□□□□□ -1.03
TRIM49-202ENST00000532501 GJB7Q6PEY0 223 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 PRSS55Q6UWB4 352 aaPredicted RBP8.61□□□□□ -1.03
TRIM49-202ENST00000532501 SCARA5Q6ZMJ2 495 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 ADGRD2Q7Z7M1 963 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 CREBRFQ8IUR6 639 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 ARHGEF19Q8IW93 802 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 POF1BQ8WVV4 589 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 TATDN2Q93075 761 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 DDX27Q96GQ7 796 aaKnown RBP8.61□□□□□ -1.03
TRIM49-202ENST00000532501 ANKRD36BP1Q96IX9 119 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 NAP1L5Q96NT1 182 aaPredicted RBP8.61□□□□□ -1.03
TRIM49-202ENST00000532501 GUCD1Q96NT3 240 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 ARID3AQ99856 593 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 LPIN3Q9BQK8 851 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 ZBP1Q9H171 429 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 VPS16Q9H269 839 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 SLC28A3Q9HAS3 691 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 TMEM8AQ9HCN3 771 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 SIX2Q9NPC8 291 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 SLC38A7Q9NVC3 462 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 SPG21Q9NZD8 308 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 HMGXB4Q9UGU5 601 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 LIMA1Q9UHB6 759 aaKnown RBP8.61□□□□□ -1.03
TRIM49-202ENST00000532501 ADAM28Q9UKQ2 775 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 BRWD1Q9NSI6 2320 aa8.61□□□□□ -1.03
TRIM49-202ENST00000532501 PRUNE2Q8WUY3 3088 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 HIDE1A8MVS5 230 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 H3BNC9 293 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 FSCN2O14926 492 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 LILRB3O75022 631 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 ASS1P00966 412 aaKnown RBP8.6□□□□□ -1.03
TRIM49-202ENST00000532501 CALCAP01258 141 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 TNNC2P02585 160 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 ALDH2P05091 517 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 SLC9A1P19634 815 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 GTF2F1P35269 517 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM49-202ENST00000532501 PIK3CAP42336 1068 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 CDH8P55286 799 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 MYL7Q01449 175 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 PLCB3Q01970 1234 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 LRMPQ12912 555 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 GPM6BQ13491 265 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 SURF1Q15526 300 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 MAN2A1Q16706 1144 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 KIAA0319Q5VV43 1072 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 PLPP4Q5VZY2 271 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 WSCD1Q658N2 575 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 DCLRE1AQ6PJP8 1040 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 LIMS2Q7Z4I7 341 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 NT5DC4Q86YG4 428 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 GPIHBP1Q8IV16 184 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 VPS52Q8N1B4 723 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 OR10T2Q8NGX3 314 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 KBTBD7Q8WVZ9 684 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 HPDLQ96IR7 371 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 SUSD3Q96L08 255 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 SENP8Q96LD8 212 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 FAM193BQ96PV7 902 aaPredicted RBP8.6□□□□□ -1.03
TRIM49-202ENST00000532501 MRPL45Q9BRJ2 306 aaKnown RBP8.6□□□□□ -1.03
TRIM49-202ENST00000532501 TUBGCP2Q9BSJ2 902 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 HERC2P3Q9BVR0 1158 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 METTL14Q9HCE5 456 aaKnown RBP8.6□□□□□ -1.03
TRIM49-202ENST00000532501 ITGA11Q9UKX5 1188 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 COQ4Q9Y3A0 265 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM49-202ENST00000532501 PLXNA4Q9HCM2 1894 aa8.6□□□□□ -1.03
TRIM49-202ENST00000532501 VWA8A3KMH1 1905 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 TDRD15B5MCY1 1934 aaKnown RBP8.59□□□□□ -1.03
TRIM49-202ENST00000532501 ATG2AQ2TAZ0 1938 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 GOLGA6L19H0YKK7 550 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 C2CD2LO14523 706 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 TADA2AO75478 443 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 VNN2O95498 520 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 GNA14O95837 355 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 AFPP02771 609 aaKnown RBP8.59□□□□□ -1.03
TRIM49-202ENST00000532501 OR4Q2P0C623 313 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 PNMA6AP0CW24 399 aaPredicted RBP8.59□□□□□ -1.03
TRIM49-202ENST00000532501 FGFR3P22607 806 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 RPL9P32969 192 aaKnown RBP8.59□□□□□ -1.03
TRIM49-202ENST00000532501 ASPAP45381 313 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 ALDH7A1P49419 539 aaKnown RBP8.59□□□□□ -1.03
TRIM49-202ENST00000532501 TAF6P49848 677 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 NOP14P78316 857 aaKnown RBP8.59□□□□□ -1.03
TRIM49-202ENST00000532501 RBP5P82980 135 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 ENPEPQ07075 957 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 ORC1Q13415 861 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 PTPN14Q15678 1187 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 SOWAHAQ2M3V2 549 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms