RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 AGPAT1Q99943 283 aa23.5■■□□□ 1.35
PACSIN3-209ENST00000532457 SMYD3Q9H7B4 428 aa23.5■■□□□ 1.35
PACSIN3-209ENST00000532457 SPTLC1O15269 473 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 STAU1O95793 577 aaKnown RBP23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 CYP11B1P15538 503 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 TMEM240Q5SV17 173 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 NYAP1Q6ZVC0 841 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 HACE1Q8IYU2 909 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 PCDHB18PQ96TA0 734 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 GDF15Q99988 308 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 RSAD1Q9HA92 442 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 LZTFL1Q9NQ48 299 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 RNF216Q9NWF9 866 aaPredicted RBP23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 DUSP10Q9Y6W6 482 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 FAM170AA1A519 330 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 OFD1O75665 1012 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 CCDC172P0C7W6 258 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 CYP3A5P20815 502 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 ZNF132P52740 706 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 KRT83P78385 493 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 TAF3Q5VWG9 929 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 OTOP2Q7RTS6 562 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.49■■□□□ 1.352e-9■□□□□ 9.1
PACSIN3-209ENST00000532457 IRX2Q9BZI1 471 aaPredicted RBP23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 UBE2OQ9C0C9 1292 aaKnown RBP23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 NAGPAQ9UK23 515 aa23.49■■□□□ 1.35
PACSIN3-209ENST00000532457 MMEP08473 750 aa23.48■■□□□ 1.35
PACSIN3-209ENST00000532457 MAGEA1P43355 309 aa23.48■■□□□ 1.35
PACSIN3-209ENST00000532457 EPHB4P54760 987 aa23.48■■□□□ 1.35
PACSIN3-209ENST00000532457 SPA17Q15506 151 aa23.48■■□□□ 1.35
PACSIN3-209ENST00000532457 FMNL3Q8IVF7 1028 aa23.48■■□□□ 1.35
PACSIN3-209ENST00000532457 RBBP8NLQ8NC74 664 aaPredicted RBP23.48■■□□□ 1.35
PACSIN3-209ENST00000532457 PGBD4Q96DM1 585 aa23.48■■□□□ 1.35
PACSIN3-209ENST00000532457 C16orf45Q96MC5 204 aaPredicted RBP23.48■■□□□ 1.35
PACSIN3-209ENST00000532457 TAS2R14Q9NYV8 317 aa23.48■■□□□ 1.35
PACSIN3-209ENST00000532457 RANBP2P49792 3224 aaKnown RBP23.48■■□□□ 1.35
PACSIN3-209ENST00000532457 POMCP01189 267 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 THP07101 528 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 SKIP12755 728 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 TNFAIP3P21580 790 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 FMO1Q01740 532 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 BMS1Q14692 1282 aaKnown RBP23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 LRRC52Q8N7C0 313 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 WHAMMQ8TF30 809 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 RABGGTAQ92696 567 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 PACSIN1Q9BY11 444 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 CFHP08603 1231 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 LRPAP1P30533 357 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 ZNF394Q53GI3 561 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 HERVK_113Q902F9 699 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 FAXDC2Q96IV6 333 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 PAAF1Q9BRP4 392 aa23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 R3HCC1Q9Y3T6 440 aaKnown RBP23.47■■□□□ 1.35
PACSIN3-209ENST00000532457 LAMA2P24043 3122 aaKnown RBP23.46■■□□□ 1.35
PACSIN3-209ENST00000532457 ZBBXA8MT70 800 aa23.46■■□□□ 1.35
PACSIN3-209ENST00000532457 CCP110O43303 1012 aa23.46■■□□□ 1.35
PACSIN3-209ENST00000532457 EOMESO95936 686 aa23.46■■□□□ 1.35
PACSIN3-209ENST00000532457 BMP8BP34820 402 aa23.46■■□□□ 1.35
PACSIN3-209ENST00000532457 MYO1EQ12965 1108 aa23.46■■□□□ 1.35
PACSIN3-209ENST00000532457 CLLU1OSQ5K130 101 aa23.46■■□□□ 1.35
PACSIN3-209ENST00000532457 CCDC122Q5T0U0 273 aa23.46■■□□□ 1.35
PACSIN3-209ENST00000532457 ALKBH5Q6P6C2 394 aaKnown RBP23.46■■□□□ 1.35
PACSIN3-209ENST00000532457 RPS6KC1Q96S38 1066 aa23.46■■□□□ 1.35
PACSIN3-209ENST00000532457 ZSWIM1Q9BR11 485 aa23.46■■□□□ 1.35
PACSIN3-209ENST00000532457 HMGXB4Q9UGU5 601 aa23.46■■□□□ 1.35
PACSIN3-209ENST00000532457 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 XPOTO43592 962 aaKnown RBP23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 FGFR1P11362 822 aa23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 ANXA13P27216 316 aa23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 VAV2P52735 878 aa23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 TWNKQ96RR1 684 aa23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 INPP5FQ9Y2H2 1132 aa23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 SNX9Q9Y5X1 595 aa23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 AMHP03971 560 aa23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 SSTR3P32745 418 aaPredicted RBP23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 CDR2Q01850 454 aa23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 ORC1Q13415 861 aa23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 KIAA1328Q86T90 577 aa23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 MMS19Q96T76 1030 aa23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 UBN1Q9NPG3 1134 aa23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 NME7Q9Y5B8 376 aa23.45■■□□□ 1.34
PACSIN3-209ENST00000532457 TMCO5BA8MYB1 307 aa23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 INPPL1O15357 1258 aa23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 CLCNKBP51801 687 aa23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 LILRA4P59901 499 aa23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 WDR5P61964 334 aaKnown RBP23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 PTPN14Q15678 1187 aa23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 SOWAHAQ2M3V2 549 aa23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 ZNF662Q6ZS27 426 aa23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 CRIPAKQ8N1N5 446 aa23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 MRPL45Q9BRJ2 306 aaKnown RBP23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 ELOVL4Q9GZR5 314 aa23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 CYP3A43Q9HB55 503 aa23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 SEPT11Q9NVA2 429 aaKnown RBP23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 SLC38A7Q9NVC3 462 aa23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 SALL4Q9UJQ4 1053 aa23.44■■□□□ 1.34
PACSIN3-209ENST00000532457 MICAL3Q7RTP6 2002 aa23.43■■□□□ 1.34
PACSIN3-209ENST00000532457 KPNA7A9QM74 516 aa23.43■■□□□ 1.34
PACSIN3-209ENST00000532457 FANCGO15287 622 aa23.43■■□□□ 1.34
PACSIN3-209ENST00000532457 B4GALT3O60512 393 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms