RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 RASAL3Q86YV0 1011 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 RILPQ96NA2 401 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 PRDM10Q9NQV6 1147 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 DDX56Q9NY93 547 aaKnown RBP8.39□□□□□ -1.07
CTNND1-230ENST00000532245 ATP8A1Q9Y2Q0 1164 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 CNTNAP2Q9UHC6 1331 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 NCK2O43639 380 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 PLA2G6O60733 806 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 CAPN2P17655 700 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 PAMP19021 973 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 STX2P32856 288 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 ETFBP38117 255 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 NOL9Q5SY16 702 aaKnown RBP8.39□□□□□ -1.07
CTNND1-230ENST00000532245 RAB44Q7Z6P3 723 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-230ENST00000532245 PCGF5Q86SE9 256 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 ITIH5Q86UX2 942 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 CACYBPQ9HB71 228 aaKnown RBP8.39□□□□□ -1.07
CTNND1-230ENST00000532245 MRPL17Q9NRX2 175 aaKnown RBP8.39□□□□□ -1.07
CTNND1-230ENST00000532245 DDIT4Q9NX09 232 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 DUSP11O75319 330 aaKnown RBP8.39□□□□□ -1.07
CTNND1-230ENST00000532245 CKBP12277 381 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 MSH2P43246 934 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 PRMT2P55345 433 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 ROR1Q01973 937 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 PLPPR4Q7Z2D5 763 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 ATPAF2Q8N5M1 289 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 SCFD1Q8WVM8 642 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 PNMA5Q96PV4 448 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 FAM114A2Q9NRY5 505 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 AGPAT5Q9NUQ2 364 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 PPP1R3GB7ZBB8 358 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 P4HA2O15460 535 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 SLC11A2P49281 568 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 NFE2Q16621 373 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-230ENST00000532245 SYT15Q9BQS2 421 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 PCDHB5Q9Y5E4 795 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-230ENST00000532245 NFASCO94856 1347 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 M0QYT0 321 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 FGBP02675 491 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SMPD1P17405 629 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 NSUN2Q08J23 767 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTNND1-230ENST00000532245 ERCC6LQ2NKX8 1250 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 ITPRIPL1Q6GPH6 555 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 TAS1R2Q8TE23 839 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 RFFLQ8WZ73 363 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 RPRD1AQ96P16 312 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-230ENST00000532245 FTHL17Q9BXU8 183 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 TMEM117Q9H0C3 514 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTNND1-230ENST00000532245 KBTBD4Q9NVX7 518 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 ITGA11Q9UKX5 1188 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 CAPN11Q9UMQ6 739 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 DOLKQ9UPQ8 538 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 NT5C1B-RDH14C9J2C7 533 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 XYLBO75191 536 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 ATICP31939 592 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 KPNA1P52294 538 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-230ENST00000532245 LBX1P52954 281 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SLC39A12Q504Y0 691 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 CCDC157Q569K6 752 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SYCP2LQ5T4T6 812 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 FBXL16Q8N461 479 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 DDI1Q8WTU0 396 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 PYROXD1Q8WU10 500 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 RNPC3Q96LT9 517 aaKnown RBP8.38□□□□□ -1.07
CTNND1-230ENST00000532245 TRPV6Q9H1D0 765 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SMPD4Q9NXE4 827 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 FIS1Q9Y3D6 152 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 PPP1R12AO14974 1030 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SYN1P17600 705 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 GLRA2P23416 452 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 IFNAR2P48551 515 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 MDM2Q00987 491 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SLC7A5Q01650 507 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 TWF1Q12792 350 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SLMAPQ14BN4 828 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SMTNL2Q2TAL5 461 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 C2CD6Q53TS8 623 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 CES5AQ6NT32 575 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SARM1Q6SZW1 724 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 ZNF467Q7Z7K2 595 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-230ENST00000532245 OR6P1Q8NGX9 317 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 AGAP3Q96P47 875 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 MFSD1Q9H3U5 465 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 RSPH14Q9UHP6 348 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SLC12A8A0AV02 714 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SPTLC1O15269 473 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 ZFXP17010 805 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-230ENST00000532245 GPD1P21695 349 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 KLHDC7AQ5VTJ3 777 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 CDKL3Q8IVW4 592 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-230ENST00000532245 CARNMT1Q8N4J0 409 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 ATP6V0D2Q8N8Y2 350 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 UBE2OQ9C0C9 1292 aaKnown RBP8.38□□□□□ -1.07
CTNND1-230ENST00000532245 WDCPQ9H6R7 721 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 HACD3Q9P035 362 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SRRDQ9UH36 339 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 TBK1Q9UHD2 729 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 FAM47DPA6NHR8 397 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms