RNA–Protein interactions for RNA: ENST00000532194.2

ABCA7-216, Transcript of ATP binding cassette subfamily A member 7, human

TSL 3

Gene ABCA7, Length 1,151 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-216	ENST00000532194	PARD6A	Q9NPB6	346 aa		13.92	□□□□□ -0.18
ABCA7-216	ENST00000532194	NCDN	Q9UBB6	729 aa		13.92	□□□□□ -0.18
ABCA7-216	ENST00000532194	ODF2L	Q9ULJ1	636 aa		13.92	□□□□□ -0.18
ABCA7-216	ENST00000532194	TBX20	Q9UMR3	447 aa		13.92	□□□□□ -0.18
ABCA7-216	ENST00000532194	SPTBN2	O15020	2390 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194		A0A0B4J269	797 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	OR6C75	A6NL08	312 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	TISP43	B9A030	160 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	OGT	O15294	1046 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	SOAT2	O75908	522 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	TYMP	P19971	482 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	LIG4	P49917	911 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	LILRA4	P59901	499 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	FCHO2	Q0JRZ9	810 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	SPATA1	Q5VX52	437 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	JADE1	Q6IE81	842 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	GPBP1	Q86WP2	473 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	ATAD1	Q8NBU5	361 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	OR10T2	Q8NGX3	314 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	BICD1	Q96G01	975 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	TMX3	Q96JJ7	454 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	LMAN1L	Q9HAT1	526 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	LARS	Q9P2J5	1176 aa	Known RBP	13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	KCNG1	Q9UIX4	513 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	CPSF3	Q9UKF6	684 aa	Known RBP	13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	SLC27A5	Q9Y2P5	690 aa		13.91	□□□□□ -0.18
ABCA7-216	ENST00000532194	ANO9	A1A5B4	782 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194		K7ENM7	598 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	ZNF263	O14978	683 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	HNRNPDL	O14979	420 aa	Known RBP	13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	NFIC	P08651	508 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	CCNE1	P24864	410 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	GJB2	P29033	226 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	MATR3	P43243	847 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	SOX9	P48436	509 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	SATB1	Q01826	763 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	MYBPC2	Q14324	1141 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	OVOS1	Q6IE37	1185 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	TXNDC11	Q6PKC3	985 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	GPIHBP1	Q8IV16	184 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	CDK5RAP3	Q96JB5	506 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	SENP8	Q96LD8	212 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	IER2	Q9BTL4	223 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	IKZF4	Q9H2S9	585 aa		13.9	□□□□□ -0.18
ABCA7-216	ENST00000532194	ANKRD63	C9JTQ0	380 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194		H0YCG3	227 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	PIR	O00625	290 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	CHAD	O15335	359 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	SLC26A4	O43511	780 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	PRAMEF12	O95522	483 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	CYP11A1	P05108	521 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	ATF6	P18850	670 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	PLCG1	P19174	1290 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	HOXC13	P31276	330 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	CDR1	P51861	262 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	MLLT6	P55198	1093 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	DMWD	Q09019	674 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	PLD1	Q13393	1074 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	DHX8	Q14562	1220 aa	Known RBP	13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	MCM6	Q14566	821 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	RABEP1	Q15276	862 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	C9orf57	Q5W0N0	161 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	DSTYK	Q6XUX3	929 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	USP37	Q86T82	979 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	PSMG2	Q969U7	264 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	AK8	Q96MA6	479 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	TSPAN18	Q96SJ8	248 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	MSTO1	Q9BUK6	570 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	GPR88	Q9GZN0	384 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	SLITRK6	Q9H5Y7	841 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	RPF1	Q9H9Y2	349 aa	Known RBP	13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	IL21	Q9HBE4	155 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	PARVG	Q9HBI0	331 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	RBM12	Q9NTZ6	932 aa	Known RBP	13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	C2orf42	Q9NWW7	574 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	KIF3A	Q9Y496	699 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	DENND4C	Q5VZ89	1909 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	OBSL1	O75147	1896 aa		13.89	□□□□□ -0.19
ABCA7-216	ENST00000532194	SLC38A8	A6NNN8	435 aa		13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194	FAM13A	O94988	1023 aa		13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194	NMT1	P30419	496 aa	Known RBP	13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194	EPHB3	P54753	998 aa		13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194	GTF2B	Q00403	316 aa		13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194	KARS	Q15046	597 aa	Known RBP	13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194	KYAT1	Q16773	422 aa		13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194		Q6ZS52	159 aa		13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194	MYCT1	Q8N699	235 aa		13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194	RAD54L	Q92698	747 aa		13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194	E2F7	Q96AV8	911 aa		13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194	ZFYVE19	Q96K21	471 aa		13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194	LPIN3	Q9BQK8	851 aa		13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194	TCHH	Q07283	1943 aa		13.88	□□□□□ -0.19
ABCA7-216	ENST00000532194	MYBPHL	A2RUH7	354 aa		13.87	□□□□□ -0.19
ABCA7-216	ENST00000532194		K7ESF4	209 aa		13.87	□□□□□ -0.19
ABCA7-216	ENST00000532194	XPOT	O43592	962 aa	Known RBP	13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms