RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 KCNH2Q12809 1159 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 KCNJ12Q14500 433 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 WDR72Q3MJ13 1102 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 CBWD6Q4V339 395 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 ZNF667Q5HYK9 610 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 CBWD3Q5JTY5 395 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 CBWD5Q5RIA9 395 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 ZNF280DQ6N043 979 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 FBXL13Q8NEE6 735 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 KLHL5Q96PQ7 755 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 MMS19Q96T76 1030 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 CDCA3Q99618 268 aaPredicted RBP23.93■■□□□ 1.42
LRRK1-208ENST00000532029 FANCLQ9NW38 375 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 FNIP2Q9P278 1114 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 MTRRQ9UBK8 725 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 CHD7Q9P2D1 2997 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 BECN2A8MW95 431 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 PER2O15055 1255 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 CAVIN2O95810 425 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 CYP11A1P05108 521 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 ADH1AP07327 375 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 CNPP09543 421 aaKnown RBP23.92■■□□□ 1.42
LRRK1-208ENST00000532029 P4HA1P13674 534 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 EEF1GP26641 437 aaKnown RBP23.92■■□□□ 1.42
LRRK1-208ENST00000532029 KLRC2P26717 231 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 NDUFV1P49821 464 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 CCDC85BQ15834 202 aaPredicted RBP23.92■■□□□ 1.42
LRRK1-208ENST00000532029 CTXN3Q4LDR2 81 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 OVOS1Q6IE37 1185 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 TOP6BLQ8N6T0 577 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 PPM1EQ8WY54 764 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 XYLT2Q9H1B5 865 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 IGFLR1Q9H665 355 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 VRTNQ9H8Y1 702 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 RAB20Q9NX57 234 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 NXF1Q9UBU9 619 aaKnown RBP23.92■■□□□ 1.42
LRRK1-208ENST00000532029 STXBP5LQ9Y2K9 1186 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 BACE2Q9Y5Z0 518 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 SCN1AP35498 2009 aa23.92■■□□□ 1.42
LRRK1-208ENST00000532029 FSD2A1L4K1 749 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 P4HA2O15460 535 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 OAZ2O95190 189 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 PRKCSHP14314 528 aaPredicted RBP23.91■■□□□ 1.42
LRRK1-208ENST00000532029 RPL17P18621 184 aaKnown RBP23.91■■□□□ 1.42
LRRK1-208ENST00000532029 MRPL58Q14197 206 aaKnown RBP23.91■■□□□ 1.42
LRRK1-208ENST00000532029 MAN2A1Q16706 1144 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 DUSP6Q16828 381 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 CDKAL1Q5VV42 579 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 WSCD1Q658N2 575 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 DPH6Q7L8W6 267 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 PPFIBP1Q86W92 1011 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 GLYCTKQ8IVS8 523 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 THEM5Q8N1Q8 247 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 TMEM86AQ8N2M4 240 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 ANKRD20A12PQ8NF67 263 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 L1RE1Q9UN81 338 aa23.91■■□□□ 1.42
LRRK1-208ENST00000532029 TEX28O15482 410 aa23.9■■□□□ 1.42
LRRK1-208ENST00000532029 CLASP2O75122 1294 aaKnown RBP23.9■■□□□ 1.42
LRRK1-208ENST00000532029 ASS1P00966 412 aaKnown RBP23.9■■□□□ 1.42
LRRK1-208ENST00000532029 HYAL1Q12794 435 aa23.9■■□□□ 1.42
LRRK1-208ENST00000532029 NCAPHQ15003 741 aa23.9■■□□□ 1.42
LRRK1-208ENST00000532029 TCP11X2Q5H9J9 407 aa23.9■■□□□ 1.42
LRRK1-208ENST00000532029 WDR44Q5JSH3 913 aa23.9■■□□□ 1.42
LRRK1-208ENST00000532029 PDCL2Q8N4E4 241 aa23.9■■□□□ 1.42
LRRK1-208ENST00000532029 MAFAQ8NHW3 353 aaPredicted RBP23.9■■□□□ 1.42
LRRK1-208ENST00000532029 TUBGCP2Q9BSJ2 902 aa23.9■■□□□ 1.42
LRRK1-208ENST00000532029 PI4K2AQ9BTU6 479 aa23.9■■□□□ 1.42
LRRK1-208ENST00000532029 OXCT2Q9BYC2 517 aaPredicted RBP23.9■■□□□ 1.42
LRRK1-208ENST00000532029 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.9■■□□□ 1.42
LRRK1-208ENST00000532029 COQ4Q9Y3A0 265 aa23.9■■□□□ 1.42
LRRK1-208ENST00000532029 ATG2AQ2TAZ0 1938 aa23.9■■□□□ 1.42
LRRK1-208ENST00000532029 VWA8A3KMH1 1905 aa23.89■■□□□ 1.42
LRRK1-208ENST00000532029 PMM2O15305 246 aa23.89■■□□□ 1.41
LRRK1-208ENST00000532029 NCK2O43639 380 aa23.89■■□□□ 1.41
LRRK1-208ENST00000532029 TPM2P07951 284 aa23.89■■□□□ 1.41
LRRK1-208ENST00000532029 CDK11BP21127 795 aaKnown RBP23.89■■□□□ 1.41
LRRK1-208ENST00000532029 SKIV2LQ15477 1246 aaKnown RBP23.89■■□□□ 1.41
LRRK1-208ENST00000532029 SOWAHAQ2M3V2 549 aa23.89■■□□□ 1.41
LRRK1-208ENST00000532029 LRSAM1Q6UWE0 723 aa23.89■■□□□ 1.41
LRRK1-208ENST00000532029 DHX40Q8IX18 779 aaKnown RBP23.89■■□□□ 1.41
LRRK1-208ENST00000532029 ADGRF2Q8IZF7 708 aa23.89■■□□□ 1.41
LRRK1-208ENST00000532029 SPATA18Q8TC71 538 aa23.89■■□□□ 1.41
LRRK1-208ENST00000532029 SEMA4DQ92854 862 aa23.89■■□□□ 1.41
LRRK1-208ENST00000532029 CLSTN3Q9BQT9 956 aa23.89■■□□□ 1.41
LRRK1-208ENST00000532029 FBXL5Q9UKA1 691 aa23.89■■□□□ 1.41
LRRK1-208ENST00000532029 POLIQ9UNA4 740 aa23.89■■□□□ 1.41
LRRK1-208ENST00000532029 CDY1Q9Y6F8 540 aa23.89■■□□□ 1.41
LRRK1-208ENST00000532029 OR6C75A6NL08 312 aa23.88■■□□□ 1.41
LRRK1-208ENST00000532029 PES1O00541 588 aaKnown RBP23.88■■□□□ 1.41
LRRK1-208ENST00000532029 OR1D2P34982 312 aa23.88■■□□□ 1.41
LRRK1-208ENST00000532029 GTF2F1P35269 517 aaKnown RBP eCLIP23.88■■□□□ 1.41
LRRK1-208ENST00000532029 NOP14P78316 857 aaKnown RBP23.88■■□□□ 1.41
LRRK1-208ENST00000532029 SPOPLQ6IQ16 392 aa23.88■■□□□ 1.41
LRRK1-208ENST00000532029 EFHBQ8N7U6 833 aa23.88■■□□□ 1.41
LRRK1-208ENST00000532029 ELMO3Q96BJ8 720 aa23.88■■□□□ 1.41
LRRK1-208ENST00000532029 TSPY26PQ9H489 355 aa23.88■■□□□ 1.41
LRRK1-208ENST00000532029 TBC1D4O60343 1298 aa23.87■■□□□ 1.41
LRRK1-208ENST00000532029 FAM163BP0C2L3 166 aa23.87■■□□□ 1.41
LRRK1-208ENST00000532029 SRGAP2BP0DMP2 458 aa23.87■■□□□ 1.41
LRRK1-208ENST00000532029 LHX1P48742 406 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms