RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 NECTIN3Q9NQS3 549 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 CATSPERZQ9NTU4 200 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 CALCOCO1Q9P1Z2 691 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 TMEFF2Q9UIK5 374 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 TMED5Q9Y3A6 229 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 CCL27Q9Y4X3 112 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 FHOD1Q9Y613 1164 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 SMARCA2P51531 1590 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 CYP2D7A0A087X1C5 515 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 ARNTLO00327 626 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 PAHP00439 452 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 THBDP07204 575 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 KELP23276 732 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 TM4SF1P30408 202 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 AARSP49588 968 aaKnown RBP eCLIP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 LACTBP83111 547 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 SSPNQ14714 243 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 TBCCQ15814 346 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 BAK1Q16611 211 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 ZNF827Q17R98 1081 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 ZNF805Q5CZA5 627 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 C3orf38Q5JPI3 329 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 PRAMEF14Q5SWL7 426 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 WDR93Q6P2C0 686 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 KLHDC10Q6PID8 442 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 GBP6Q6ZN66 633 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 CATSPERGQ6ZRH7 1159 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 DPP10Q8N608 796 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 OR1N1Q8NGS0 311 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 RNF139Q8WU17 664 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 FAM216AQ8WUB2 273 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 NRG4Q8WWG1 115 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 MTFMTQ96DP5 389 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 KTI12Q96EK9 354 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 COG3Q96JB2 828 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 AP5M1Q9H0R1 490 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 PNNQ9H307 717 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 ABHD16BQ9H3Z7 469 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 OPA3Q9H6K4 179 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 SERHLQ9NQF3 203 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 SNX15Q9NRS6 342 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 TAB2Q9NYJ8 693 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 CSADQ9Y600 493 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 A0A0G2JPF8 293 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 KRBA1A5PL33 1030 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 HNRNPCL3B7ZW38 293 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 CTAGE5O15320 804 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 CEP104O60308 925 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 EXOC3O60645 756 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 PHF2O75151 1096 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 MTRF1O75570 445 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 HNRNPCL4P0DMR1 293 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 PSMC6P62333 389 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 NKX6-1P78426 367 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 BEX3Q00994 111 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 NMIQ13287 307 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 MPP3Q13368 585 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 IL10RAQ13651 578 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 MORF4L2Q15014 288 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 CRY1Q16526 586 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 DPY19L1Q2PZI1 675 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 SMU1Q2TAY7 513 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 PITRM1Q5JRX3 1037 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 OLFML2BQ68BL8 750 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 CCDC62Q6P9F0 684 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 CTR9Q6PD62 1173 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 KRT73Q86Y46 540 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 CCDC117Q8IWD4 279 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 FIBCD1Q8N539 461 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 DCLK2Q8N568 766 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 TMEM57Q8N5G2 664 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 GMCL1P1Q8NEA9 526 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 NPLOC4Q8TAT6 608 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 SYTL5Q8TDW5 730 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 CSGALNACT1Q8TDX6 532 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 RTF1Q92541 710 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 DPH2Q9BQC3 489 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 SLC39A3Q9BRY0 314 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 ANKRD2Q9GZV1 360 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 PABPC3Q9H361 631 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 CCDC86Q9H6F5 360 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 TCP11L1Q9NUJ3 509 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 CPSF3Q9UKF6 684 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 PCDHB12Q9Y5F1 795 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 J3QW42 95 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 SLC27A2O14975 620 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 ATXN7O15265 892 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 MEFVO15553 781 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 TBC1D4O60343 1298 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 DDHD2O94830 711 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 LPLP06858 475 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 COL6A2P12110 1019 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 LCP1P13796 627 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 NPR1P16066 1061 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 MSX1P28360 303 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 RNF144AP50876 292 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 GPR68Q15743 365 aa5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 IFI16Q16666 785 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-222ENST00000531967 BOLA3Q53S33 107 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms