RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-209	ENST00000531474	LAG3	P18627	525 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	CTNNB1	P35222	781 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	WNT7B	P56706	349 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	MYL7	Q01449	175 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	TAP1	Q03518	808 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	CYP24A1	Q07973	514 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	TMEM132D	Q14C87	1099 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	XKR4	Q5GH76	650 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	DPY19L2P1	Q6NXN4	242 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	ALKAL1	Q6UXT8	129 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	IRF2BP2	Q7Z5L9	587 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	ZNF280B	Q86YH2	543 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	CD302	Q8IX05	232 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	C18orf25	Q96B23	403 aa	Predicted RBP	10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	CCDC127	Q96BQ5	260 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	KIF12	Q96FN5	646 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	FBXL18	Q96ME1	805 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	ZMAT2	Q96NC0	199 aa	Known RBP	10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	PPP1R10	Q96QC0	940 aa	Known RBP	10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	IRX2	Q9BZI1	471 aa	Predicted RBP	10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	CWH43	Q9H720	699 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	SLC28A3	Q9HAS3	691 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	APEX2	Q9UBZ4	518 aa		10.14	□□□□□ -0.79
NXF1-209	ENST00000531474	CTAGE15	A4D2H0	777 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	CASTOR2	A6NHX0	329 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	SOX1	O00570	391 aa	Predicted RBP	10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	ATP8B1	O43520	1251 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	B4GALT3	O60512	393 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	TADA3	O75528	432 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	DDHD2	O94830	711 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	CTAGE8	P0CG41	777 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	DLAT	P10515	647 aa	Known RBP	10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	TCP1	P17987	556 aa	Known RBP	10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	MCM3	P25205	808 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	SOX5	P35711	763 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	PBX3	P40426	434 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	JAM2	P57087	298 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	RBM10	P98175	930 aa	Known RBP	10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	TFAM	Q00059	246 aa	Known RBP	10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	POU5F1	Q01860	360 aa	Known RBP	10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	CYP27A1	Q02318	531 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	PSMD6	Q15008	389 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	NAB2	Q15742	525 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	HABP4	Q5JVS0	413 aa	Known RBP	10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	JADE1	Q6IE81	842 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	SPRED2	Q7Z698	418 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	CTAGE6	Q86UF2	777 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	CTAGE4	Q8IX94	777 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	MFSD14A	Q96MC6	490 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	ZNF558	Q96NG5	402 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	TGS1	Q96RS0	853 aa	Known RBP	10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	FNBP1	Q96RU3	617 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	C17orf80	Q9BSJ5	609 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	LACRT	Q9GZZ8	138 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	INTS2	Q9H0H0	1204 aa	Known RBP	10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	ASB7	Q9H672	318 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	NRDE2	Q9H7Z3	1164 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	CERS4	Q9HA82	394 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	PDE11A	Q9HCR9	933 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	AAAS	Q9NRG9	546 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	SLC38A7	Q9NVC3	462 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	DNAJB4	Q9UDY4	337 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	TUBGCP4	Q9UGJ1	667 aa		10.13	□□□□□ -0.79
NXF1-209	ENST00000531474	PRG3	Q9Y2Y8	225 aa	Predicted RBP	10.13	□□□□□ -0.79
NXF1-209	ENST00000531474		A0A0A6YYK5	440 aa	Predicted RBP	10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	ZNF263	O14978	683 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	XPOT	O43592	962 aa	Known RBP	10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	PLEK	P08567	350 aa	Predicted RBP	10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	TMEM191B	P0C7N4	346 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	OR1G1	P47890	313 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	SLC11A1	P49279	550 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	ALDH7A1	P49419	539 aa	Known RBP	10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	GUCY2F	P51841	1108 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	MFAP3	P55082	362 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	BCAR1	P56945	870 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	SOX4	Q06945	474 aa	Predicted RBP	10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	DSC1	Q08554	894 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	TUSC3	Q13454	348 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	SURF1	Q15526	300 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	ERCC6L	Q2NKX8	1250 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	LMBRD2	Q68DH5	695 aa	Predicted RBP	10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	KRT39	Q6A163	491 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	CCDC70	Q6NSX1	233 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	KCNT2	Q6UVM3	1135 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	RSRC2	Q7L4I2	434 aa	Known RBP	10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	ENOSF1	Q7L5Y1	443 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	TRAPPC11	Q7Z392	1133 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	EFCAB13	Q8IY85	973 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	COLGALT2	Q8IYK4	626 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	COLGALT1	Q8NBJ5	622 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	BEST2	Q8NFU1	509 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	PARD3B	Q8TEW8	1205 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	ARNTL2	Q8WYA1	636 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	CLP1	Q92989	425 aa	Known RBP	10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	LRCH3	Q96II8	777 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	FAM84A	Q96KN4	292 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	CGRRF1	Q99675	332 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	TMEM175	Q9BSA9	504 aa		10.12	□□□□□ -0.79
NXF1-209	ENST00000531474	GOLGA2P5	Q9HBQ8	144 aa		10.12	□□□□□ -0.79

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