RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 DAAM2Q86T65 1068 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 RNF180Q86T96 592 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 TTC39CQ8N584 583 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 SLC43A3Q8NBI5 491 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 SLAIN1Q8ND83 568 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 BEST2Q8NFU1 509 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 RAET1EQ8TD07 263 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 ACTRT1Q8TDG2 376 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 CPA5Q8WXQ8 436 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 TFAP2BQ92481 460 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 CD101Q93033 1021 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 CAPZA3Q96KX2 299 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 NUP85Q9BW27 656 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 ZNF518BQ9C0D4 1074 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 LHX5Q9H2C1 402 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 GOLPH3Q9H4A6 298 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 SMYD3Q9H7B4 428 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 ERVK-5Q9HDB9 667 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 CTTNBP2NLQ9P2B4 639 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 NXF1Q9UBU9 619 aaKnown RBP11.64□□□□□ -0.55
SRPRA-205ENST00000531104 CNOT8Q9UFF9 292 aaKnown RBP11.64□□□□□ -0.55
SRPRA-205ENST00000531104 TMEM59LQ9UK28 342 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 RAB21Q9UL25 225 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 TTC7AQ9ULT0 858 aaPredicted RBP11.64□□□□□ -0.55
SRPRA-205ENST00000531104 UBQLN1Q9UMX0 589 aaKnown RBP11.64□□□□□ -0.55
SRPRA-205ENST00000531104 HES2Q9Y543 173 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 IPPQ9Y573 584 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 ALG6Q9Y672 507 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 FRMPD3Q5JV73 1810 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 SMIM28A0A1B0GU29 152 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 TCRBV5S1A1TA0A578 114 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 PIRO00625 290 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 CAND2O75155 1236 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 INHAP05111 366 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 CD58P19256 250 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 MMP8P22894 467 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 BRD2P25440 801 aaKnown RBP11.63□□□□□ -0.55
SRPRA-205ENST00000531104 PAFAH1B1P43034 410 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 NSFP46459 744 aaKnown RBP11.63□□□□□ -0.55
SRPRA-205ENST00000531104 RAP1GAPP47736 663 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 CDH8P55286 799 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 ITGA7Q13683 1181 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 DSC3Q14574 896 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 ARHGEF6Q15052 776 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 PTGISQ16647 500 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 CFAP221Q4G0U5 840 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 C9orf57Q5W0N0 161 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 PLEKHA7Q6IQ23 1121 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 FBXO38Q6PIJ6 1188 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 SCARA5Q6ZMJ2 495 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 MRPL10Q7Z7H8 261 aaKnown RBP11.63□□□□□ -0.55
SRPRA-205ENST00000531104 WDTC1Q8N5D0 677 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 SLC4A11Q8NBS3 891 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 ARRDC4Q8NCT1 418 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 SPATA4Q8NEY3 305 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 ZNF564Q8TBZ8 553 aaPredicted RBP11.63□□□□□ -0.55
SRPRA-205ENST00000531104 C18orf25Q96B23 403 aaPredicted RBP11.63□□□□□ -0.55
SRPRA-205ENST00000531104 TWNKQ96RR1 684 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 TRAIPQ9BWF2 469 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 PARD6BQ9BYG5 372 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 TRIM6Q9C030 488 aaPredicted RBP11.63□□□□□ -0.55
SRPRA-205ENST00000531104 ELOVL4Q9GZR5 314 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 EPC1Q9H2F5 836 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 TUBGCP4Q9UGJ1 667 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 ST3GAL5Q9UNP4 418 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 SQORQ9Y6N5 450 aa11.63□□□□□ -0.55
SRPRA-205ENST00000531104 TARSL2A2RTX5 802 aaKnown RBP11.62□□□□□ -0.55
SRPRA-205ENST00000531104 MIF4GDA9UHW6 222 aaKnown RBP11.62□□□□□ -0.55
SRPRA-205ENST00000531104 PPEF2O14830 753 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
SRPRA-205ENST00000531104 MED7O43513 233 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 RPS6KA5O75582 802 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 CD4P01730 458 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 TUBBP07437 444 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 RRM1P23921 792 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 AKAP5P24588 427 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 CTNNA2P26232 953 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 LRPAP1P30533 357 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 PEX5P50542 639 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 GSCP56915 257 aaPredicted RBP11.62□□□□□ -0.55
SRPRA-205ENST00000531104 MYO1EQ12965 1108 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 FAM47CQ5HY64 1035 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 FBXO47Q5MNV8 452 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 TMEM35BQ8NCS4 154 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 CAGE1Q8TC20 777 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 ZNF296Q8WUU4 475 aaPredicted RBP11.62□□□□□ -0.55
SRPRA-205ENST00000531104 TMEM176AQ96HP8 235 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 MS4A14Q96JA4 679 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 PSMB7Q99436 277 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 AGO3Q9H9G7 860 aaKnown RBP11.62□□□□□ -0.55
SRPRA-205ENST00000531104 GDAP2Q9NXN4 497 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 EHD2Q9NZN4 543 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 KIAA1257Q9ULG3 409 aa11.62□□□□□ -0.55
SRPRA-205ENST00000531104 BARX2Q9UMQ3 279 aaPredicted RBP11.62□□□□□ -0.55
SRPRA-205ENST00000531104 KCNK3O14649 394 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 PTGESO14684 152 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 GPR182O15218 404 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 XPOTO43592 962 aaKnown RBP11.61□□□□□ -0.55
SRPRA-205ENST00000531104 ZNF623O75123 536 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 FAM163BP0C2L3 166 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms