RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CYTH3O43739 400 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 KDM1AO60341 852 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 KCNA6P17658 529 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 COPB2P35606 906 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 GALCP54803 685 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 AQP4P55087 323 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 ZBTB17Q13105 803 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 KRT81Q14533 505 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 SPCS2Q15005 226 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 OGFRL1Q5TC84 451 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-214ENST00000530886 DCDC5Q6ZRR9 648 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 NOP9Q86U38 636 aaKnown RBP8.57□□□□□ -1.04
CSDE1-214ENST00000530886 DNAAF5Q86Y56 855 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 BLIDQ8IZY5 108 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 CHPT1Q8WUD6 406 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 FAM161BQ96MY7 647 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 OSBPL10Q9BXB5 764 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 FHDC1Q9C0D6 1143 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-214ENST00000530886 Q9H521 79 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 PARVBQ9HBI1 364 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 SIX2Q9NPC8 291 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 HEY2Q9UBP5 337 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 RSL24D1Q9UHA3 163 aaKnown RBP8.57□□□□□ -1.04
CSDE1-214ENST00000530886 SLC7A8Q9UHI5 535 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 PCDHA4Q9UN74 947 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 NEU2Q9Y3R4 380 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 SPATA31A1Q5TZJ5 1347 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 MYMKA6NI61 221 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 UCHL3P15374 230 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 IVDP26440 423 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 FOLH1Q04609 750 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 GRB10Q13322 594 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 CATIPQ7Z7H3 387 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 NLRX1Q86UT6 975 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 ANKRD36BP1Q96IX9 119 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 NPHS2Q9NP85 383 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 SELENONQ9NZV5 590 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 H3BNX3 289 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 ITM2AO43736 263 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 LDHAP00338 332 aaKnown RBP8.56□□□□□ -1.04
CSDE1-214ENST00000530886 LMNB1P20700 586 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 GCAP28676 217 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 COG7P83436 770 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 PTK6Q13882 451 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 CTTNQ14247 550 aaKnown RBP8.56□□□□□ -1.04
CSDE1-214ENST00000530886 RNF111Q6ZNA4 994 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 SV2BQ7L1I2 683 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 PTF1AQ7RTS3 328 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 UBL4BQ8N7F7 174 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 PRPF31Q8WWY3 499 aaKnown RBP8.56□□□□□ -1.04
CSDE1-214ENST00000530886 SNF8Q96H20 258 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 DCAF5Q96JK2 942 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 FGFBP2Q9BYJ0 223 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 TRIM55Q9BYV6 548 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 TBC1D23Q9NUY8 699 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 CDH7Q9ULB5 785 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 MTUS1Q9ULD2 1270 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 SQORQ9Y6N5 450 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 MYH14Q7Z406 1995 aaKnown RBP8.56□□□□□ -1.04
CSDE1-214ENST00000530886 TANC1Q9C0D5 1861 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 FOXO6A8MYZ6 492 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 POTECB2RU33 542 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 FAM47E-STBD1D6RA91 191 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 THAP12O43422 761 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 FGFR1P11362 822 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 POLR2EP19388 210 aaKnown RBP8.56□□□□□ -1.04
CSDE1-214ENST00000530886 HOXD11P31277 338 aaPredicted RBP8.56□□□□□ -1.04
CSDE1-214ENST00000530886 MAN1A1P33908 653 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 CHKAP35790 457 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 FDFT1P37268 417 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 RXRGP48443 463 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 ALDH3B2P48448 385 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 CCDC142Q17RM4 750 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 ARL13BQ3SXY8 428 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 EXOC8Q8IYI6 725 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 SYNE4Q8N205 404 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 MAGEB6Q8N7X4 407 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 RFWD2Q8NHY2 731 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 BORCS5Q969J3 196 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 NACC2Q96BF6 587 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 DNAJC19Q96DA6 116 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 SH3GL1Q99961 368 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 ZSWIM1Q9BR11 485 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 VPS11Q9H270 941 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 KCTD10Q9H3F6 313 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 IGSF9BQ9UPX0 1349 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 A0A1W2PRG0 241 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 CCNT2O60583 730 aaKnown RBP8.56□□□□□ -1.04
CSDE1-214ENST00000530886 PCP11498 1178 aaKnown RBP8.56□□□□□ -1.04
CSDE1-214ENST00000530886 CCR3P51677 355 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 ARID5AQ03989 594 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 BTKQ06187 659 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 ZNF829Q3KNS6 432 aaPredicted RBP8.56□□□□□ -1.04
CSDE1-214ENST00000530886 PPP4R3CPQ6ZMV5 832 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 PTCD2Q8WV60 388 aaKnown RBP8.56□□□□□ -1.04
CSDE1-214ENST00000530886 NSMCE3Q96MG7 304 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 NLRP4Q96MN2 994 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 NACAP1Q9BZK3 213 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 TRABDQ9H4I3 376 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 TUT1Q9H6E5 874 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms