RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 PTPN14Q15678 1187 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 MIIPQ5JXC2 388 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 RTP2Q5QGT7 225 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 DSTYKQ6XUX3 929 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 TMC7Q7Z402 723 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 TOP6BLQ8N6T0 577 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 APPL2Q8NEU8 664 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 LMO3Q8TAP4 145 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 TCF25Q9BQ70 676 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.24■□□□□ 0.35
BRK1-201ENST00000530758 MRPL17Q9NRX2 175 aaKnown RBP17.24■□□□□ 0.35
BRK1-201ENST00000530758 FNIP2Q9P278 1114 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 DSEQ9UL01 958 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 MYO7AQ13402 2215 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 C2orf71A6NGG8 1288 aa17.23■□□□□ 0.35
BRK1-201ENST00000530758 I3L4J1 428 aa17.23■□□□□ 0.35
BRK1-201ENST00000530758 TULP1O00294 542 aaPredicted RBP17.23■□□□□ 0.35
BRK1-201ENST00000530758 CYB561D2O14569 222 aa17.23■□□□□ 0.35
BRK1-201ENST00000530758 CXCL14O95715 111 aa17.23■□□□□ 0.35
BRK1-201ENST00000530758 IGFBP4P22692 258 aa17.23■□□□□ 0.35
BRK1-201ENST00000530758 TKTP29401 623 aaKnown RBP17.23■□□□□ 0.35
BRK1-201ENST00000530758 MTIF2P46199 727 aaKnown RBP17.23■□□□□ 0.35
BRK1-201ENST00000530758 VWA3BQ502W6 1294 aa17.23■□□□□ 0.35
BRK1-201ENST00000530758 ANKS3Q6ZW76 656 aa17.23■□□□□ 0.35
BRK1-201ENST00000530758 APTXQ7Z2E3 356 aaKnown RBP17.23■□□□□ 0.35
BRK1-201ENST00000530758 SEMA4DQ92854 862 aa17.23■□□□□ 0.35
BRK1-201ENST00000530758 OXCT2Q9BYC2 517 aaPredicted RBP17.23■□□□□ 0.35
BRK1-201ENST00000530758 TSPY26PQ9H489 355 aa17.23■□□□□ 0.35
BRK1-201ENST00000530758 BACE2Q9Y5Z0 518 aa17.23■□□□□ 0.35
BRK1-201ENST00000530758 MTCL1Q9Y4B5 1905 aaKnown RBP17.23■□□□□ 0.35
BRK1-201ENST00000530758 BECN2A8MW95 431 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 GABRDO14764 452 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 TACC1O75410 805 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 URODP06132 367 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 ODC1P11926 461 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 CREMQ03060 361 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 CETN1Q12798 172 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 KRT31Q15323 416 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 SOWAHAQ2M3V2 549 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 WDR72Q3MJ13 1102 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 VARS2Q5ST30 1063 aaKnown RBP17.22■□□□□ 0.35
BRK1-201ENST00000530758 KIAA1841Q6NSI8 718 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 TMEM86AQ8N2M4 240 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 EHBP1Q8NDI1 1231 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 PPM1EQ8WY54 764 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 ANP32EQ9BTT0 268 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 NDST4Q9H3R1 872 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 FAM124BQ9H5Z6 455 aaPredicted RBP17.22■□□□□ 0.35
BRK1-201ENST00000530758 MMRN2Q9H8L6 949 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 MTRRQ9UBK8 725 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 SNX9Q9Y5X1 595 aa17.22■□□□□ 0.35
BRK1-201ENST00000530758 HIDE1A8MVS5 230 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 H7C4K7 107 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 HUS1O60921 280 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 LRRN2O75325 713 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 PIK3CAP42336 1068 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 YWHAHQ04917 246 aaPredicted RBP17.21■□□□□ 0.35
BRK1-201ENST00000530758 CCDC85BQ15834 202 aaPredicted RBP17.21■□□□□ 0.35
BRK1-201ENST00000530758 ZNF699Q32M78 642 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 HSP90AA4PQ58FG1 418 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 ZNF667Q5HYK9 610 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 SMYD5Q6GMV2 418 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 LUZP1Q86V48 1076 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 CEP57Q86XR8 500 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 CREBRFQ8IUR6 639 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 MICAL1Q8TDZ2 1067 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 RIN2Q8WYP3 895 aaPredicted RBP17.21■□□□□ 0.35
BRK1-201ENST00000530758 B3GALT6Q96L58 329 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 NSUN3Q9H649 340 aaKnown RBP17.21■□□□□ 0.35
BRK1-201ENST00000530758 ENTPD7Q9NQZ7 604 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 L1RE1Q9UN81 338 aa17.21■□□□□ 0.35
BRK1-201ENST00000530758 P4HA1P13674 534 aa17.2■□□□□ 0.34
BRK1-201ENST00000530758 CDK11BP21127 795 aaKnown RBP17.2■□□□□ 0.34
BRK1-201ENST00000530758 MYL7Q01449 175 aa17.2■□□□□ 0.34
BRK1-201ENST00000530758 SLC8B1Q6J4K2 584 aa17.2■□□□□ 0.34
BRK1-201ENST00000530758 PDCL2Q8N4E4 241 aa17.2■□□□□ 0.34
BRK1-201ENST00000530758 ANKRD20A12PQ8NF67 263 aa17.2■□□□□ 0.34
BRK1-201ENST00000530758 KLHL5Q96PQ7 755 aa17.2■□□□□ 0.34
BRK1-201ENST00000530758 CLSTN3Q9BQT9 956 aa17.2■□□□□ 0.34
BRK1-201ENST00000530758 COL25A1Q9BXS0 654 aaPredicted RBP17.2■□□□□ 0.34
BRK1-201ENST00000530758 BCO2Q9BYV7 579 aa17.2■□□□□ 0.34
BRK1-201ENST00000530758 IMPG2Q9BZV3 1241 aa17.2■□□□□ 0.34
BRK1-201ENST00000530758 APOBEC3GQ9HC16 384 aaKnown RBP17.2■□□□□ 0.34
BRK1-201ENST00000530758 XIRP2A4UGR9 3374 aa17.19■□□□□ 0.34
BRK1-201ENST00000530758 DLL1O00548 723 aa17.19■□□□□ 0.34
BRK1-201ENST00000530758 CNPP09543 421 aaKnown RBP17.19■□□□□ 0.34
BRK1-201ENST00000530758 ATP1A3P13637 1013 aa17.19■□□□□ 0.34
BRK1-201ENST00000530758 WARSP23381 471 aaKnown RBP17.19■□□□□ 0.34
BRK1-201ENST00000530758 ASPAP45381 313 aa17.19■□□□□ 0.34
BRK1-201ENST00000530758 LHX1P48742 406 aa17.19■□□□□ 0.34
BRK1-201ENST00000530758 COPB1P53618 953 aaKnown RBP17.19■□□□□ 0.34
BRK1-201ENST00000530758 NOP14P78316 857 aaKnown RBP17.19■□□□□ 0.34
BRK1-201ENST00000530758 KCNC3Q14003 757 aa17.19■□□□□ 0.34
BRK1-201ENST00000530758 COL19A1Q14993 1142 aa17.19■□□□□ 0.34
BRK1-201ENST00000530758 PSMD5Q16401 504 aa17.19■□□□□ 0.34
BRK1-201ENST00000530758 WDR44Q5JSH3 913 aa17.19■□□□□ 0.34
BRK1-201ENST00000530758 PLPP4Q5VZY2 271 aa17.19■□□□□ 0.34
BRK1-201ENST00000530758 WSCD1Q658N2 575 aa17.19■□□□□ 0.34
BRK1-201ENST00000530758 OVOS1Q6IE37 1185 aa17.19■□□□□ 0.34
BRK1-201ENST00000530758 PRSS55Q6UWB4 352 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms