RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 L1RE1Q9UN81 338 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 R3HCC1Q9Y3T6 440 aaKnown RBP22.91■■□□□ 1.26
CAPN1-220ENST00000530567 TBC1D4O60343 1298 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 AFPP02771 609 aaKnown RBP22.91■■□□□ 1.26
CAPN1-220ENST00000530567 CNPP09543 421 aaKnown RBP22.91■■□□□ 1.26
CAPN1-220ENST00000530567 EEF1GP26641 437 aaKnown RBP22.91■■□□□ 1.26
CAPN1-220ENST00000530567 MTIF2P46199 727 aaKnown RBP22.91■■□□□ 1.26
CAPN1-220ENST00000530567 MYL7Q01449 175 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 PSMD5Q16401 504 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 WSCD1Q658N2 575 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 LRSAM1Q6UWE0 723 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 RSPO2Q6UXX9 243 aaPredicted RBP22.91■■□□□ 1.26
CAPN1-220ENST00000530567 CREBRFQ8IUR6 639 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 FBXL13Q8NEE6 735 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 APOBEC3GQ9HC16 384 aaKnown RBP22.91■■□□□ 1.26
CAPN1-220ENST00000530567 CBX8Q9HC52 389 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 MAGEC2Q9UBF1 373 aaPredicted RBP22.91■■□□□ 1.26
CAPN1-220ENST00000530567 SSX2IPQ9Y2D8 614 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 TEX28O15482 410 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 ADAM12O43184 909 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 OAZ2O95190 189 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 RPL17P18621 184 aaKnown RBP22.9■■□□□ 1.26
CAPN1-220ENST00000530567 ZNF445P59923 1031 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 BMS1Q14692 1282 aaKnown RBP22.9■■□□□ 1.26
CAPN1-220ENST00000530567 MAN2A1Q16706 1144 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 SOWAHAQ2M3V2 549 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 SGSM1Q2NKQ1 1148 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 WDR72Q3MJ13 1102 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 MIIPQ5JXC2 388 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 SPOPLQ6IQ16 392 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 ANKS3Q6ZW76 656 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 PDCL2Q8N4E4 241 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 KLHL5Q96PQ7 755 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 CLSTN3Q9BQT9 956 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 TUBGCP2Q9BSJ2 902 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.9■■□□□ 1.26
CAPN1-220ENST00000530567 RAB20Q9NX57 234 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 FNIP2Q9P278 1114 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 POLIQ9UNA4 740 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 BACE2Q9Y5Z0 518 aa22.9■■□□□ 1.26
CAPN1-220ENST00000530567 EYSQ5T1H1 3165 aa22.89■■□□□ 1.25
CAPN1-220ENST00000530567 P4HA2O15460 535 aa22.89■■□□□ 1.25
CAPN1-220ENST00000530567 N4BP1O75113 896 aaKnown RBP22.89■■□□□ 1.25
CAPN1-220ENST00000530567 CA8P35219 290 aa22.89■■□□□ 1.25
CAPN1-220ENST00000530567 GTF2F1P35269 517 aaKnown RBP eCLIP22.89■■□□□ 1.25
CAPN1-220ENST00000530567 NOP14P78316 857 aaKnown RBP22.89■■□□□ 1.25
CAPN1-220ENST00000530567 YWHAHQ04917 246 aaPredicted RBP22.89■■□□□ 1.25
CAPN1-220ENST00000530567 HYAL1Q12794 435 aa22.89■■□□□ 1.25
CAPN1-220ENST00000530567 DUSP6Q16828 381 aa22.89■■□□□ 1.25
CAPN1-220ENST00000530567 PDXDC1Q6P996 788 aa22.89■■□□□ 1.25
CAPN1-220ENST00000530567 TOP6BLQ8N6T0 577 aa22.89■■□□□ 1.25
CAPN1-220ENST00000530567 TAF4BQ92750 862 aa22.89■■□□□ 1.25
CAPN1-220ENST00000530567 RTP3Q9BQQ7 232 aa22.89■■□□□ 1.25
CAPN1-220ENST00000530567 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.89■■□□□ 1.25
CAPN1-220ENST00000530567 DSEQ9UL01 958 aa22.89■■□□□ 1.25
CAPN1-220ENST00000530567 ARHGEF37A1IGU5 675 aa22.88■■□□□ 1.25
CAPN1-220ENST00000530567 PER2O15055 1255 aa22.88■■□□□ 1.25
CAPN1-220ENST00000530567 CLASP2O75122 1294 aaKnown RBP22.88■■□□□ 1.25
CAPN1-220ENST00000530567 CAVIN2O95810 425 aa22.88■■□□□ 1.25
CAPN1-220ENST00000530567 NRIP1P48552 1158 aa22.88■■□□□ 1.25
CAPN1-220ENST00000530567 KRT31Q15323 416 aa22.88■■□□□ 1.25
CAPN1-220ENST00000530567 ZNF667Q5HYK9 610 aa22.88■■□□□ 1.25
CAPN1-220ENST00000530567 OVOS1Q6IE37 1185 aa22.88■■□□□ 1.25
CAPN1-220ENST00000530567 RBM23Q86U06 439 aaKnown RBP22.88■■□□□ 1.25
CAPN1-220ENST00000530567 MICALL1Q8N3F8 863 aa22.88■■□□□ 1.25
CAPN1-220ENST00000530567 LMO3Q8TAP4 145 aa22.88■■□□□ 1.25
CAPN1-220ENST00000530567 KBTBD7Q8WVZ9 684 aa22.88■■□□□ 1.25
CAPN1-220ENST00000530567 SMYD3Q9H7B4 428 aa22.88■■□□□ 1.25
CAPN1-220ENST00000530567 NXF1Q9UBU9 619 aaKnown RBP22.88■■□□□ 1.25
CAPN1-220ENST00000530567 FBXL5Q9UKA1 691 aa22.88■■□□□ 1.25
CAPN1-220ENST00000530567 PLXNA3P51805 1871 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 SMTNL1A8MU46 457 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 HUS1O60921 280 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 ATP1A3P13637 1013 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 ASPAP45381 313 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 TNNC1P63316 161 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 CREMQ03060 361 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 VWA3BQ502W6 1294 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 ZNF280DQ6N043 979 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 DPH6Q7L8W6 267 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 APTXQ7Z2E3 356 aaKnown RBP22.87■■□□□ 1.25
CAPN1-220ENST00000530567 LUZP1Q86V48 1076 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 OSTM1Q86WC4 334 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 ADGRF2Q8IZF7 708 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 EMILIN2Q9BXX0 1053 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 SDCBP2Q9H190 292 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 TSPY26PQ9H489 355 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 TLE6Q9H808 572 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 TAB2Q9NYJ8 693 aa22.87■■□□□ 1.25
CAPN1-220ENST00000530567 H7C4K7 107 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 GABRDO14764 452 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 PRKCSHP14314 528 aaPredicted RBP22.86■■□□□ 1.25
CAPN1-220ENST00000530567 NDUFV1P49821 464 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 KCNC3Q14003 757 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 COL19A1Q14993 1142 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 CTXN3Q4LDR2 81 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 SLC8B1Q6J4K2 584 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 TMEM86AQ8N2M4 240 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 VN1R2Q8NFZ6 395 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 OR10T2Q8NGX3 314 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms