RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 TYMPP19971 482 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 TNFSF9P41273 254 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 MATR3P43243 847 aaKnown RBP eCLIP16.23■□□□□ 0.19
CAPN1-219ENST00000530495 ALDH1A3P47895 512 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 NCKAP1LP55160 1127 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 ATP2C1P98194 919 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-219ENST00000530495 MYBPC2Q14324 1141 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 RILPL1Q5EBL4 403 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 ARSHQ5FYA8 562 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 DSTYKQ6XUX3 929 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 HAUS6Q7Z4H7 955 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 USP37Q86T82 979 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 ARID3BQ8IVW6 561 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-219ENST00000530495 YAF2Q8IY57 180 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 PLIN2Q99541 437 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 KIF2CQ99661 725 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 C8orf33Q9H7E9 229 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-219ENST00000530495 ASB3Q9Y575 518 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 NPHP3-ACAD11A0A0J9YXS1 232 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 XPOTO43592 962 aaKnown RBP16.22■□□□□ 0.19
CAPN1-219ENST00000530495 FAM189A1O60320 539 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 LRP3O75074 770 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 PLA2G4BP0C869 781 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 SCP2P22307 547 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 PAX3P23760 479 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 LILRA4P59901 499 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 SATB1Q01826 763 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 PPP2R3AQ06190 1150 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 SPEM2Q0P670 501 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 LRRC32Q14392 662 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 OVOS1Q6IE37 1185 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 DNAJB7Q7Z6W7 309 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-219ENST00000530495 PSMG2Q969U7 264 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 BICD1Q96G01 975 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 MKNK1Q9BUB5 465 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 HSFX1Q9UBD0 423 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 SLC27A5Q9Y2P5 690 aa16.22■□□□□ 0.19
CAPN1-219ENST00000530495 NUP210Q8TEM1 1887 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-219ENST00000530495 MYBPHLA2RUH7 354 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 MTMR11A4FU01 709 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 SLC38A8A6NNN8 435 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 OGTO15294 1046 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 HRO43593 1189 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 PAPSS2O95340 614 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-219ENST00000530495 FGF19O95750 216 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 RETP07949 1114 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 CNR2P34972 360 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 LIG4P49917 911 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 KPNA1P52294 538 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-219ENST00000530495 ENOX2Q16206 610 aaKnown RBP16.21■□□□□ 0.19
CAPN1-219ENST00000530495 LPAL2Q16609 132 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 STXBP5Q5T5C0 1151 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 SPATA1Q5VX52 437 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 GAREM2Q75VX8 874 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 RALGPS2Q86X27 583 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-219ENST00000530495 GPIHBP1Q8IV16 184 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 ATAD1Q8NBU5 361 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 LRRC3BQ96PB8 259 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 OBP2AQ9NY56 170 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 ODF2LQ9ULJ1 636 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 TBX20Q9UMR3 447 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 NCOR2Q9Y618 2525 aa16.21■□□□□ 0.19
CAPN1-219ENST00000530495 ANK1P16157 1881 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 A0A0B4J269 797 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 DCDC2BA2VCK2 349 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 VWA3AA6NCI4 1184 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 SPECC1L-ADORA2AF8WAN1 911 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 PIGRP01833 764 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 WEE1P30291 646 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 SOX9P48436 509 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 GUCY2FP51841 1108 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-219ENST00000530495 SIM2Q14190 667 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-219ENST00000530495 TMEM119Q4V9L6 283 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 ARHGAP29Q52LW3 1261 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 WDR44Q5JSH3 913 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 DGKKQ5KSL6 1271 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 ARL6IP4Q66PJ3 421 aaKnown RBP16.2■□□□□ 0.18
CAPN1-219ENST00000530495 ARMCX5Q6P1M9 558 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 CD302Q8IX05 232 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 CDK5RAP3Q96JB5 506 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 CNTNAP3BQ96NU0 1288 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 CNTNAP3Q9BZ76 1288 aa16.2■□□□□ 0.18
CAPN1-219ENST00000530495 RPF1Q9H9Y2 349 aaKnown RBP16.2■□□□□ 0.18
CAPN1-219ENST00000530495 RBM12Q9NTZ6 932 aaKnown RBP16.2■□□□□ 0.18
CAPN1-219ENST00000530495 CHURC1-FNTBB4DL54 471 aa16.19■□□□□ 0.18
CAPN1-219ENST00000530495 K7ESF4 209 aa16.19■□□□□ 0.18
CAPN1-219ENST00000530495 PIRO00625 290 aa16.19■□□□□ 0.18
CAPN1-219ENST00000530495 PPEF2O14830 753 aa16.19■□□□□ 0.18
CAPN1-219ENST00000530495 HNRNPDLO14979 420 aaKnown RBP16.19■□□□□ 0.18
CAPN1-219ENST00000530495 SLC26A4O43511 780 aa16.19■□□□□ 0.18
CAPN1-219ENST00000530495 HOXA6P31267 233 aa16.19■□□□□ 0.18
CAPN1-219ENST00000530495 CTHP32929 405 aa16.19■□□□□ 0.18
CAPN1-219ENST00000530495 FNTBP49356 437 aa16.19■□□□□ 0.18
CAPN1-219ENST00000530495 DMWDQ09019 674 aa16.19■□□□□ 0.18
CAPN1-219ENST00000530495 GPR158Q5T848 1215 aa16.19■□□□□ 0.18
CAPN1-219ENST00000530495 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
CAPN1-219ENST00000530495 MCTP1Q6DN14 999 aa16.19■□□□□ 0.18
CAPN1-219ENST00000530495 TXNDC11Q6PKC3 985 aa16.19■□□□□ 0.18
CAPN1-219ENST00000530495 PRR23BQ6ZRT6 265 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms