RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 STOMP27105 288 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 KPNA1P52294 538 aaPredicted RBP13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 TFDP1Q14186 410 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 CC2D1AQ6P1N0 951 aaPredicted RBP13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 VPS35Q96QK1 796 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 POLIQ9UNA4 740 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 EFR3BQ9Y2G0 817 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 MTO1Q9Y2Z2 717 aaKnown RBP13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 CDK13Q14004 1512 aaKnown RBP13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 LOC100506127A0A0U1RQW1 187 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 DFFAO00273 331 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 APOL3O95236 402 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 OR52Z1P0C646 297 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 COPAP53621 1224 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 TRABDQ9H4I3 376 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 CARD8Q9Y2G2 431 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 B2RBV5 119 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 KCNT1Q5JUK3 1230 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 TSPAN14Q8NG11 270 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 KATNAL1Q9BW62 490 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 TEKT3Q9BXF9 490 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 GJA3Q9Y6H8 435 aa13.2□□□□□ -0.3
PDE4DIP-227ENST00000529945 PRXQ9BXM0 1461 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 TOP3BO95985 862 aaKnown RBP13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 MAPKAPK5Q8IW41 473 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 CAB39LQ9H9S4 337 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 TRPM5Q9NZQ8 1165 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 TUBGCP4Q9UGJ1 667 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 LRFN2Q9ULH4 789 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 VAMP4O75379 141 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 MAGEA6P43360 314 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 IL5RAQ01344 420 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 SPIRE1Q08AE8 756 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 NSL1Q96IY1 281 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 OSBPL8Q9BZF1 889 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 FAM50BQ9Y247 325 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 MYH15Q9Y2K3 1946 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 PSMD11O00231 422 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 GAS2O43903 313 aaKnown RBP13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 NNMTP40261 264 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 SYNPOQ8N3V7 929 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 CCDC33Q8N5R6 958 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 NACC2Q96BF6 587 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 RHOBTB2Q9BYZ6 727 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 LATS2Q9NRM7 1088 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 SNX13Q9Y5W8 968 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 FRMPD2Q68DX3 1309 aaPredicted RBP13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 PRG4Q92954 1404 aaPredicted RBP13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 TUBA1BP68363 451 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 ARID5BQ14865 1188 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 PPP2R5BQ15173 497 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 MAN2A1Q16706 1144 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 LMBR1LQ6UX01 489 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 TUBA1AQ71U36 451 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 ZCCHC17Q9NP64 241 aaKnown RBP13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 SLC52A1Q9NWF4 448 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 NIP7Q9Y221 180 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 NPR3P17342 541 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 EAPPQ56P03 285 aaPredicted RBP13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 DSTYKQ6XUX3 929 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 ATP9AO75110 1047 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 SULF1Q8IWU6 871 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 RHOT2Q8IXI1 618 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 USP13Q92995 863 aaPredicted RBP13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 PGBD4Q96DM1 585 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 CMTM6Q9NX76 183 aa13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 MAP3K20Q9NYL2 800 aaKnown RBP13.19□□□□□ -0.3
PDE4DIP-227ENST00000529945 ARPC4-TTLL3A0A0A6YYG9 625 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 PHGDHO43175 533 aaKnown RBP13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 MDH1P40925 334 aaKnown RBP13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 CYP4Z1Q86W10 505 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 SPICE1Q8N0Z3 855 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 LSM14AQ8ND56 463 aaKnown RBP13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 RORBQ92753 470 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 CD274Q9NZQ7 290 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 RBMX2Q9Y388 322 aaKnown RBP13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 ADCY6O43306 1168 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 QPRTQ15274 297 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 HMBOX1Q6NT76 420 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 ATG16L2Q8NAA4 619 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 FAM213AQ9BRX8 229 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 NUAK2Q9H093 628 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 PUS7LQ9H0K6 701 aaKnown RBP13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 AXIN2Q9Y2T1 843 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 RASA1P20936 1047 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 CDH3P22223 829 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 DLG1Q12959 904 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 FAM160B1Q5W0V3 765 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 UTP15Q8TED0 518 aaKnown RBP13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 XPR1Q9UBH6 696 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 RPS6KB2Q9UBS0 482 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 C9IYK1 514 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 KPNA3O00505 521 aaPredicted RBP13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 CLIC2O15247 247 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 GPAA1O43292 621 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 TCF4P15884 667 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 GJA9P57773 515 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 TUBA4AP68366 448 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms