RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 SP3Q02447 781 aa16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 PTP4A2Q12974 167 aa16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 PPP1R2P3Q6NXS1 205 aa16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 C8orf74Q6P047 294 aa16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 TAF2Q6P1X5 1199 aa16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 KRT35Q92764 455 aa16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 ZMAT2Q96NC0 199 aaKnown RBP16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 TRIM7Q9C029 511 aa16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 SPC25Q9HBM1 224 aa16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 ADAM22Q9P0K1 906 aa16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 ANAPC7Q9UJX3 599 aa16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 TTC7AQ9ULT0 858 aaPredicted RBP16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 DERAQ9Y315 318 aa16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 LSM8O95777 96 aaKnown RBP16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 STAU1O95793 577 aaKnown RBP16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 MCM3P25205 808 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 MARCKSL1P49006 195 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 RBP5P82980 135 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 MMS22LQ6ZRQ5 1243 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 PHLDB2Q86SQ0 1253 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 WHAMMQ8TF30 809 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 UBE2Q2Q8WVN8 375 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 TRIM6Q9C030 488 aaPredicted RBP16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 RNF186Q9NXI6 227 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 PCDHGC3Q9UN70 934 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 RECQL4O94761 1208 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 ELNP15502 786 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 MMP8P22894 467 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 CCND3P30281 292 aaPredicted RBP16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 PEX5P50542 639 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 YARSP54577 528 aaKnown RBP16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 RAD23BP54727 409 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 SLC7A5Q01650 507 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 ZBTB6Q15916 424 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 DEFB115Q30KQ5 88 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 GLE1Q53GS7 698 aaKnown RBP16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 UBXN11Q5T124 520 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 LIN9Q5TKA1 542 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 GDF6Q6KF10 455 aaPredicted RBP16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 ALKAL1Q6UXT8 129 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 UBL4BQ8N7F7 174 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 RNPC3Q96LT9 517 aaKnown RBP16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 KRT12Q99456 494 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 CELF4Q9BZC1 486 aaKnown RBP16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 WNT8AQ9H1J5 351 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 CYP3A43Q9HB55 503 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 CNTN3Q9P232 1028 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 HMGXB4Q9UGU5 601 aa16.44■□□□□ 0.22
CCDC90B-213ENST00000529611 ATP8B1O43520 1251 aa16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 SPOPO43791 374 aa16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 CILPO75339 1184 aa16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 SASH3O75995 380 aa16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 PAEPP09466 180 aa16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 P4HA1P13674 534 aa16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 PRKAR2AP13861 404 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 CDH5P33151 784 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 PLEKHA7Q6IQ23 1121 aa16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 C1orf131Q8NDD1 294 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 RUBCNQ92622 972 aa16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 TWNKQ96RR1 684 aa16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 AP1M1Q9BXS5 423 aa16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 FUT8Q9BYC5 575 aa16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 XPNPEP3Q9NQH7 507 aa16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 STIM2Q9P246 746 aa16.43■□□□□ 0.22
CCDC90B-213ENST00000529611 FGGP02679 453 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 AKAP5P24588 427 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 CTNNA1P35221 906 aaKnown RBP16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 TNNC1P63316 161 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 ZNF211Q13398 564 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 FAM228AQ86W67 206 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 WDTC1Q8N5D0 677 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 SLC4A11Q8NBS3 891 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 TMEM35BQ8NCS4 154 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 HINFPQ9BQA5 517 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 APOL6Q9BWW8 343 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 ZNF518BQ9C0D4 1074 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 ELOVL4Q9GZR5 314 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 FAM53CQ9NYF3 392 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 TUBGCP4Q9UGJ1 667 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 L1RE1Q9UN81 338 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 SCN1AP35498 2009 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 KRIT1O00522 736 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 MYBL2P10244 700 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 CD19P15391 556 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 CTNNA2P26232 953 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 MRPS6P82932 125 aaKnown RBP16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 ORC1Q13415 861 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 MAMLD1Q13495 774 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 GLRA4Q5JXX5 417 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 CCNI2Q6ZMN8 369 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 WNT8BQ93098 351 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 PCDHA3Q9Y5H8 950 aa16.42■□□□□ 0.22
CCDC90B-213ENST00000529611 BRCA2P51587 3418 aa16.41■□□□□ 0.22
CCDC90B-213ENST00000529611 CCDC66A2RUB6 948 aa16.41■□□□□ 0.22
CCDC90B-213ENST00000529611 SPDYE4A6NLX3 237 aa16.41■□□□□ 0.22
CCDC90B-213ENST00000529611 PPEF2O14830 753 aa16.41■□□□□ 0.22
CCDC90B-213ENST00000529611 ASGR1P07306 291 aa16.41■□□□□ 0.22
CCDC90B-213ENST00000529611 ITGA4P13612 1032 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms