RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 UCHL3P15374 230 aa13.03□□□□□ -0.32
TRAF3IP2-211ENST00000528599 CUL2Q13617 745 aa13.03□□□□□ -0.32
TRAF3IP2-211ENST00000528599 SCARA5Q6ZMJ2 495 aa13.03□□□□□ -0.32
TRAF3IP2-211ENST00000528599 TMC6Q7Z403 805 aa13.03□□□□□ -0.32
TRAF3IP2-211ENST00000528599 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
TRAF3IP2-211ENST00000528599 NAA15Q9BXJ9 866 aaKnown RBP13.03□□□□□ -0.32
TRAF3IP2-211ENST00000528599 BCO2Q9BYV7 579 aa13.03□□□□□ -0.32
TRAF3IP2-211ENST00000528599 TTYH3Q9C0H2 523 aa13.03□□□□□ -0.32
TRAF3IP2-211ENST00000528599 SMYD3Q9H7B4 428 aa13.03□□□□□ -0.32
TRAF3IP2-211ENST00000528599 DNAJC12Q9UKB3 198 aa13.03□□□□□ -0.32
TRAF3IP2-211ENST00000528599 ADAM28Q9UKQ2 775 aa13.03□□□□□ -0.32
TRAF3IP2-211ENST00000528599 CYB561D2O14569 222 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 EFEMP2O95967 443 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 WEE2P0C1S8 567 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 TRIM21P19474 475 aaKnown RBP13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 CDC25BP30305 580 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 RAP1GAPP47736 663 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 CDH8P55286 799 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 POLR2FP61218 127 aaKnown RBP13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 TNNC1P63316 161 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 GCNT1Q02742 428 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 SOWAHAQ2M3V2 549 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 GPR153Q6NV75 609 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 DSTYKQ6XUX3 929 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 LIMS2Q7Z4I7 341 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 IGSF21Q96ID5 467 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 SUSD3Q96L08 255 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 MMS19Q96T76 1030 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 VN1R3Q9BXE9 311 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 GPR62Q9BZJ7 368 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 NLRC4Q9NPP4 1024 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 L1RE1Q9UN81 338 aa13.02□□□□□ -0.32
TRAF3IP2-211ENST00000528599 M0QZQ0 153 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 GYPCP04921 128 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PAX3P23760 479 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CLCN1P35523 988 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TAP1Q03518 808 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TBX2Q13207 712 aaPredicted RBP13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 RAB30Q15771 203 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ARHGAP44Q17R89 818 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 FIGNQ5HY92 759 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 FUT10Q6P4F1 479 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TAS1R1Q7RTX1 841 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 DEFB123Q8N688 67 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 FAXDC2Q96IV6 333 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 MRPL45Q9BRJ2 306 aaKnown RBP13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 C17orf80Q9BSJ5 609 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ZNF576Q9H609 170 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 AAASQ9NRG9 546 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SPG21Q9NZD8 308 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 FBXL5Q9UKA1 691 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PCDHB12Q9Y5F1 795 aa13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TIMM13Q9Y5L4 95 aaPredicted RBP13.02□□□□□ -0.33
TRAF3IP2-211ENST00000528599 MYO9BQ13459 2157 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 EPOPA6NHQ4 379 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 HUS1O60921 280 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 P4HA1P13674 534 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ACO1P21399 889 aaKnown RBP13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TBXAS1P24557 533 aaPredicted RBP13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 BMPR1AP36894 532 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 MFAP3P55082 362 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 GRIN2CQ14957 1233 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 WSCD1Q658N2 575 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PPP2R2DQ66LE6 453 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PDCL2Q8N4E4 241 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TOP6BLQ8N6T0 577 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 UBR7Q8N806 425 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 APPL2Q8NEU8 664 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 KBTBD7Q8WVZ9 684 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 BAP1Q92560 729 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 B3GALT6Q96L58 329 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 GUCD1Q96NT3 240 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 NUP58Q9BVL2 599 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 GPR88Q9GZN0 384 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CERS4Q9HA82 394 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CYP3A43Q9HB55 503 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CEP72Q9P209 647 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 MSRAQ9UJ68 235 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 NME7Q9Y5B8 376 aa13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SF3B1O75533 1304 aaKnown RBP eCLIP13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TRAPPC3O43617 180 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 FGF18O76093 207 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PNMA6AP0CW24 399 aaPredicted RBP13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CD58P19256 250 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 RFX1P22670 979 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TKTP29401 623 aaKnown RBP13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CASP14P31944 242 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CTNNB1P35222 781 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PPM1AP35813 382 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 JAM2P57087 298 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 RAPGEF1Q13905 1077 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 DRAP1Q14919 205 aaPredicted RBP13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ZNF697Q5TEC3 545 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 FAM171A1Q5VUB5 890 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ENOSF1Q7L5Y1 443 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 DPH6Q7L8W6 267 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 OSTM1Q86WC4 334 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms