RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	SIX4	Q9UIU6	781 aa		12.7	□□□□□ -0.38
PSMC3-205	ENST00000528362	CDH7	Q9ULB5	785 aa		12.7	□□□□□ -0.38
PSMC3-205	ENST00000528362	HCN4	Q9Y3Q4	1203 aa		12.7	□□□□□ -0.38
PSMC3-205	ENST00000528362	ZNF233	A6NK53	670 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	KPNA7	A9QM74	516 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	ANHX	E9PGG2	379 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	CYB561D2	O14569	222 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	CLIC2	O15247	247 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	LRG1	P02750	347 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	ITGB3	P05106	788 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	RHO	P08100	348 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	PRR29	P0C7W0	189 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	LAMP2	P13473	410 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	PNPLA4	P41247	253 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	CYP2J2	P51589	502 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	STK4	Q13043	487 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	GPR17	Q13304	367 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	TDG	Q13569	410 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	MYBPC2	Q14324	1141 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	SNRNP35	Q16560	246 aa	Known RBP	12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	KNOP1	Q1ED39	458 aa	Known RBP	12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	SLC5A9	Q2M3M2	681 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	SV2C	Q496J9	727 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	PABPC1L	Q4VXU2	614 aa	Known RBP	12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	WSCD1	Q658N2	575 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	LMBRD2	Q68DH5	695 aa	Predicted RBP	12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	HS2ST1	Q7LGA3	356 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	LRRC52	Q8N7C0	313 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	OR5B17	Q8NGF7	314 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	CACTIN	Q8WUQ7	758 aa	Known RBP	12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	FGF13	Q92913	245 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	PBXIP1	Q96AQ6	731 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	ZNF560	Q96MR9	790 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	PGLYRP2	Q96PD5	576 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	CRISPLD1	Q9H336	500 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	KIAA1586	Q9HCI6	787 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	IGSF9	Q9P2J2	1179 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	ITGA11	Q9UKX5	1188 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	DSE	Q9UL01	958 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	MAFF	Q9ULX9	164 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	AGAP1	Q9UPQ3	857 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	YIPF1	Q9Y548	306 aa		12.69	□□□□□ -0.38
PSMC3-205	ENST00000528362	DENND4A	Q7Z401	1863 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	MTMR11	A4FU01	709 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	NRG2	O14511	850 aa	Predicted RBP	12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	PDGFB	P01127	241 aa	Predicted RBP	12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	MYL1	P05976	194 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	TMEM191B	P0C7N4	346 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	SNRPF	P62306	86 aa	Known RBP	12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	NUCB2	P80303	420 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	TWF1	Q12792	350 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	HTR4	Q13639	388 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	KRBA2	Q6ZNG9	492 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	NPAS3	Q8IXF0	933 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	C12orf56	Q8IXR9	622 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	CSGALNACT2	Q8N6G5	542 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	TTC9B	Q8N6N2	239 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	ATAD1	Q8NBU5	361 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	ST13P5	Q8NFI4	369 aa	Predicted RBP	12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	AVEN	Q9NQS1	362 aa	Predicted RBP	12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	INTS13	Q9NVM9	706 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	CEP72	Q9P209	647 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	DUSP12	Q9UNI6	340 aa		12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	12.68	□□□□□ -0.38
PSMC3-205	ENST00000528362	CIT	O14578	2027 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	NARS	O43776	548 aa	Known RBP	12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	RPN1	P04843	607 aa	Known RBP	12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	CEBPB	P17676	345 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	RBP5	P82980	135 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	CYP24A1	Q07973	514 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	DPYD	Q12882	1025 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	BFSP1	Q12934	665 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	DUSP4	Q13115	394 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	PSMD6	Q15008	389 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	CENPP	Q6IPU0	288 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	POTEH	Q6S545	545 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	METTL23	Q86XA0	190 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	WDR49	Q8IV35	697 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	PDCL2	Q8N4E4	241 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	SLC44A3	Q8N4M1	653 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	XXYLT1	Q8NBI6	393 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	RDH13	Q8NBN7	331 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	ING5	Q8WYH8	240 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	NXPE3	Q969Y0	559 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	ANKRD36BP1	Q96IX9	119 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	MFSD14A	Q96MC6	490 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	CORO1B	Q9BR76	489 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	ZCWPW1	Q9H0M4	648 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	GZF1	Q9H116	711 aa	Predicted RBP	12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	CGN	Q9P2M7	1197 aa	Known RBP	12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	L1RE1	Q9UN81	338 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	MRPS23	Q9Y3D9	190 aa	Known RBP	12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	NUMBL	Q9Y6R0	609 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	WDFY4	Q6ZS81	3184 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	TRIP11	Q15643	1979 aa		12.67	□□□□□ -0.38
PSMC3-205	ENST00000528362	SOAT2	O75908	522 aa		12.66	□□□□□ -0.38
PSMC3-205	ENST00000528362	RHOBTB3	O94955	611 aa		12.66	□□□□□ -0.38
PSMC3-205	ENST00000528362	ZNF202	O95125	648 aa		12.66	□□□□□ -0.38
PSMC3-205	ENST00000528362	TNNC2	P02585	160 aa		12.66	□□□□□ -0.38
PSMC3-205	ENST00000528362	KRT19	P08727	400 aa		12.66	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms