RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 RASSF3Q86WH2 238 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 CALML6Q8TD86 181 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 C18orf8Q96DM3 657 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 SH3GL1Q99961 368 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 TRIM51Q9BSJ1 452 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 BRD8Q9H0E9 1235 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 DNAJC5Q9H3Z4 198 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 ZFP69BQ9UJL9 534 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 TBX20Q9UMR3 447 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 AREL1O15033 823 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 GHRP10912 638 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 NCF2P19878 526 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-218ENST00000528232 GTF2H1P32780 548 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 CDH6P55285 790 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 NPEPPSP55786 919 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 ARPC4P59998 168 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 NFX1Q12986 1120 aaKnown RBP7.57□□□□□ -1.2
CTNND1-218ENST00000528232 HIF1AQ16665 826 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 OR6J1Q8NGC5 347 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 SLC30A5Q8TAD4 765 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 URGCPQ8TCY9 931 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 VPS39Q96JC1 886 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 TNIP3Q96KP6 325 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 NR1H4Q96RI1 486 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-218ENST00000528232 CCDC134Q9H6E4 229 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 NOD2Q9HC29 1040 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 TEKT2Q9UIF3 430 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 CACNA1FO60840 1977 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 AFDNP55196 1824 aaKnown RBP7.57□□□□□ -1.2
CTNND1-218ENST00000528232 VIL1P09327 827 aaKnown RBP7.57□□□□□ -1.2
CTNND1-218ENST00000528232 KLRC1P26715 233 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 PPARGP37231 505 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-218ENST00000528232 NUP107P57740 925 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 IER5Q5VY09 327 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 CENPPQ6IPU0 288 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 KIAA1841Q6NSI8 718 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 TXNRD3Q86VQ6 643 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 TPCN2Q8NHX9 752 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 TAAR1Q96RJ0 339 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 ATAD3AQ9NVI7 634 aa7.57□□□□□ -1.2
CTNND1-218ENST00000528232 A0A0G2JND7 137 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 GAS2O43903 313 aaKnown RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 CCDC22O60826 627 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 SERPINB8P50452 374 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 EIF3EP60228 445 aaKnown RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 TMEM132DQ14C87 1099 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 MFSD4BQ5TF39 518 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 C3orf67Q6ZVT6 689 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 JAMLQ86YT9 394 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 MCUQ8NE86 351 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 ETNK1Q9HBU6 452 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 IL17RBQ9NRM6 502 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 RWDD3Q9Y3V2 267 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 DLG5Q8TDM6 1919 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 SMAPO00193 183 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 FAM107AO95990 144 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 COMTP21964 271 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 GMPSP49915 693 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 HP1BP3Q5SSJ5 553 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 ANGEL2Q5VTE6 544 aaKnown RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 DDX42Q86XP3 938 aaKnown RBP eCLIP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 GIPC2Q8TF65 315 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 SCG3Q8WXD2 468 aaKnown RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 BTBD7Q9P203 1132 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 DPEP1P16444 411 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 HERVK_113P62684 666 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 MAP3K10Q02779 954 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 PAPD7Q5XG87 772 aaKnown RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 C1orf228Q6PIY5 440 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 SLC16A10Q8TF71 515 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 FSD1LQ9BXM9 530 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 MRPS26Q9BYN8 205 aaKnown RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 ROPN1BQ9BZX4 212 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 TMEM117Q9H0C3 514 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 DHX35Q9H5Z1 703 aaKnown RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 ROPN1Q9HAT0 212 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 APOBEC2Q9Y235 224 aaKnown RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 TMX2Q9Y320 296 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 CAB39Q9Y376 341 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 TMEM191CA6NGB0 347 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 SSTR3P32745 418 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 COPS2P61201 443 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 FKBP1AP62942 108 aaKnown RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 SNAPC2Q13487 334 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 WDR72Q3MJ13 1102 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 PCNX4Q63HM2 1172 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 WDR93Q6P2C0 686 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 LRRC31Q6UY01 552 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 FAM47EQ6ZV65 393 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 PPM1NQ8N819 430 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 ATP6V1E2Q96A05 226 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 BLOC1S6Q9UL45 172 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 SMG5Q9UPR3 1016 aaKnown RBP7.56□□□□□ -1.2
CTNND1-218ENST00000528232 NFAT5O94916 1531 aa7.56□□□□□ -1.2
CTNND1-218ENST00000528232 A0A0A6YYK5 440 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 SPDYE2BA6NHP3 402 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 F8W8V4 182 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 KPNA4O00629 521 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 CHEK2O96017 543 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 SPDYE6P0CI01 402 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms