RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PAGE5Q96GU1 130 aa35.68■■■■□ 3.3
SSSCA1-205ENST00000527920 CHAMP1Q96JM3 812 aa35.68■■■■□ 3.3
SSSCA1-205ENST00000527920 AGPAT3Q9NRZ7 376 aa35.68■■■■□ 3.3
SSSCA1-205ENST00000527920 HSPBP1Q9NZL4 362 aa35.68■■■■□ 3.3
SSSCA1-205ENST00000527920 CGNQ9P2M7 1197 aaKnown RBP35.68■■■■□ 3.3
SSSCA1-205ENST00000527920 ITGA11Q9UKX5 1188 aa35.68■■■■□ 3.3
SSSCA1-205ENST00000527920 A0A1B0GVL5 298 aa35.67■■■■□ 3.3
SSSCA1-205ENST00000527920 ZNF233A6NK53 670 aa35.67■■■■□ 3.3
SSSCA1-205ENST00000527920 TGFB1I1O43294 461 aa35.67■■■■□ 3.3
SSSCA1-205ENST00000527920 RHOP08100 348 aa35.67■■■■□ 3.3
SSSCA1-205ENST00000527920 PTPN2P17706 415 aa35.67■■■■□ 3.3
SSSCA1-205ENST00000527920 SURF1Q15526 300 aa35.67■■■■□ 3.3
SSSCA1-205ENST00000527920 LRRC52Q8N7C0 313 aa35.67■■■■□ 3.3
SSSCA1-205ENST00000527920 PDE11AQ9HCR9 933 aa35.67■■■■□ 3.3
SSSCA1-205ENST00000527920 A0A1W2PQ27 194 aa35.66■■■■□ 3.3
SSSCA1-205ENST00000527920 A0A1W2PQ64 194 aa35.66■■■■□ 3.3
SSSCA1-205ENST00000527920 A0A1W2PQD8 194 aa35.66■■■■□ 3.3
SSSCA1-205ENST00000527920 KPNA7A9QM74 516 aa35.66■■■■□ 3.3
SSSCA1-205ENST00000527920 CYB561D2O14569 222 aa35.66■■■■□ 3.3
SSSCA1-205ENST00000527920 HS2ST1Q7LGA3 356 aa35.66■■■■□ 3.3
SSSCA1-205ENST00000527920 GRAMD1CQ8IYS0 662 aa35.66■■■■□ 3.3
SSSCA1-205ENST00000527920 SLC44A3Q8N4M1 653 aa35.66■■■■□ 3.3
SSSCA1-205ENST00000527920 ITFG1Q8TB96 612 aa35.66■■■■□ 3.3
SSSCA1-205ENST00000527920 SCN1AP35498 2009 aa35.66■■■■□ 3.3
SSSCA1-205ENST00000527920 DOCK6Q96HP0 2047 aa35.66■■■■□ 3.3
SSSCA1-205ENST00000527920 KLRC4O43908 158 aa35.65■■■■□ 3.3
SSSCA1-205ENST00000527920 METTL23Q86XA0 190 aa35.65■■■■□ 3.3
SSSCA1-205ENST00000527920 ELMOD1Q8N336 334 aa35.65■■■■□ 3.3
SSSCA1-205ENST00000527920 CXorf38Q8TB03 319 aa35.65■■■■□ 3.3
SSSCA1-205ENST00000527920 RSAD2Q8WXG1 361 aa35.65■■■■□ 3.3
SSSCA1-205ENST00000527920 HSFX1Q9UBD0 423 aa35.65■■■■□ 3.3
SSSCA1-205ENST00000527920 MRPS23Q9Y3D9 190 aaKnown RBP35.65■■■■□ 3.3
SSSCA1-205ENST00000527920 MICAL2O94851 1124 aa35.64■■■■□ 3.3
SSSCA1-205ENST00000527920 VNN2O95498 520 aa35.64■■■■□ 3.3
SSSCA1-205ENST00000527920 POLR2BP30876 1174 aaKnown RBP35.64■■■■□ 3.3
SSSCA1-205ENST00000527920 MTSS1LQ765P7 747 aa35.64■■■■□ 3.3
SSSCA1-205ENST00000527920 CBWD2Q8IUF1 395 aa35.64■■■■□ 3.3
SSSCA1-205ENST00000527920 NPAS3Q8IXF0 933 aa35.64■■■■□ 3.3
SSSCA1-205ENST00000527920 C12orf56Q8IXR9 622 aa35.64■■■■□ 3.3
SSSCA1-205ENST00000527920 LEMD2Q8NC56 503 aa35.64■■■■□ 3.3
SSSCA1-205ENST00000527920 SLC39A2Q9NP94 309 aa35.64■■■■□ 3.3
SSSCA1-205ENST00000527920 GDE1Q9NZC3 331 aa35.64■■■■□ 3.3
SSSCA1-205ENST00000527920 ITGB3P05106 788 aa35.63■■■■□ 3.29
SSSCA1-205ENST00000527920 OR4Q2P0C623 313 aa35.63■■■■□ 3.29
SSSCA1-205ENST00000527920 SYKP43405 635 aa35.63■■■■□ 3.29
SSSCA1-205ENST00000527920 PSMD2Q13200 908 aa35.63■■■■□ 3.29
SSSCA1-205ENST00000527920 PLD1Q13393 1074 aa35.63■■■■□ 3.29
SSSCA1-205ENST00000527920 NELFCDQ8IXH7 590 aa35.63■■■■□ 3.29
SSSCA1-205ENST00000527920 NOC3LQ8WTT2 800 aaKnown RBP35.63■■■■□ 3.29
SSSCA1-205ENST00000527920 EXOC1Q9NV70 894 aa35.63■■■■□ 3.29
SSSCA1-205ENST00000527920 INTS13Q9NVM9 706 aa35.63■■■■□ 3.29
SSSCA1-205ENST00000527920 AGAP1Q9UPQ3 857 aa35.63■■■■□ 3.29
SSSCA1-205ENST00000527920 YIPF1Q9Y548 306 aa35.63■■■■□ 3.29
SSSCA1-205ENST00000527920 NOTCH4Q99466 2003 aa35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 TSC2P49815 1807 aa35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 TMEM191BP0C7N4 346 aa35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 TWF1Q12792 350 aa35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 KNOP1Q1ED39 458 aaKnown RBP35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 SLC5A9Q2M3M2 681 aa35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 IQCEQ6IPM2 695 aa35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 CENPPQ6IPU0 288 aa35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 THEM5Q8N1Q8 247 aa35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 OR10T2Q8NGX3 314 aa35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 ANKRD36BP1Q96IX9 119 aa35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 MTMR12Q9C0I1 747 aa35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 NUMBLQ9Y6R0 609 aa35.62■■■■□ 3.29
SSSCA1-205ENST00000527920 MTMR11A4FU01 709 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 ZNF197O14709 1029 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 SRFP11831 508 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 NDUFA8P51970 172 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 EPHA5P54756 1037 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 RBP5P82980 135 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 SMARCB1Q12824 385 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 SNRNP35Q16560 246 aaKnown RBP35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 PRSS36Q5K4E3 855 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 WDR49Q8IV35 697 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 CSGALNACT2Q8N6G5 542 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 GOLGA5Q8TBA6 731 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 ZNF512Q96ME7 567 aaPredicted RBP35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 CORO1BQ9BR76 489 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 ZCWPW1Q9H0M4 648 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 CEP72Q9P209 647 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 SIX4Q9UIU6 781 aa35.61■■■■□ 3.29
SSSCA1-205ENST00000527920 PLA2G5P39877 138 aa35.6■■■■□ 3.29
SSSCA1-205ENST00000527920 WSCD1Q658N2 575 aa35.6■■■■□ 3.29
SSSCA1-205ENST00000527920 XXYLT1Q8NBI6 393 aa35.6■■■■□ 3.29
SSSCA1-205ENST00000527920 SPATA18Q8TC71 538 aa35.6■■■■□ 3.29
SSSCA1-205ENST00000527920 PGLYRP2Q96PD5 576 aa35.6■■■■□ 3.29
SSSCA1-205ENST00000527920 PRRX2Q99811 253 aa35.6■■■■□ 3.29
SSSCA1-205ENST00000527920 RTP3Q9BQQ7 232 aa35.6■■■■□ 3.29
SSSCA1-205ENST00000527920 GDAP2Q9NXN4 497 aa35.6■■■■□ 3.29
SSSCA1-205ENST00000527920 WNT16Q9UBV4 365 aa35.6■■■■□ 3.29
SSSCA1-205ENST00000527920 PDGFBP01127 241 aaPredicted RBP35.59■■■■□ 3.29
SSSCA1-205ENST00000527920 NUCB2P80303 420 aa35.59■■■■□ 3.29
SSSCA1-205ENST00000527920 DUSP4Q13115 394 aa35.59■■■■□ 3.29
SSSCA1-205ENST00000527920 DUOXA2Q1HG44 320 aa35.59■■■■□ 3.29
SSSCA1-205ENST00000527920 TMEM174Q8WUU8 243 aa35.59■■■■□ 3.29
SSSCA1-205ENST00000527920 FGF14Q92915 247 aa35.59■■■■□ 3.29
SSSCA1-205ENST00000527920 TMEM209Q96SK2 561 aa35.59■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms