RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 AGAP1Q9UPQ3 857 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 MRPS23Q9Y3D9 190 aaKnown RBP16.78■□□□□ 0.28
CAPN1-213ENST00000527897 TSC2P49815 1807 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 ZNF233A6NK53 670 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 ACTN4O43707 911 aaKnown RBP16.77■□□□□ 0.28
CAPN1-213ENST00000527897 CFHP08603 1231 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 PTPN2P17706 415 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 CYP2J2P51589 502 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 BFSP1Q12934 665 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 SV2CQ496J9 727 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 EPM2AIP1Q7L775 607 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-213ENST00000527897 NT5DC4Q86YG4 428 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 CBWD2Q8IUF1 395 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 CSGALNACT2Q8N6G5 542 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 ZNF507Q8TCN5 953 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 SCFD1Q8WVM8 642 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 FAM122AQ96E09 287 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 PAGE5Q96GU1 130 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 ZNF560Q96MR9 790 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 OXCT2Q9BYC2 517 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-213ENST00000527897 MTMR12Q9C0I1 747 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 EXOC1Q9NV70 894 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 DUSP12Q9UNI6 340 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 R3HCC1Q9Y3T6 440 aaKnown RBP16.77■□□□□ 0.28
CAPN1-213ENST00000527897 NUMBLQ9Y6R0 609 aa16.77■□□□□ 0.28
CAPN1-213ENST00000527897 NOTCH4Q99466 2003 aa16.77■□□□□ 0.27
CAPN1-213ENST00000527897 PVALEFA0A1B0GWK0 134 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 KPNA7A9QM74 516 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 KIAA0391O15091 583 aaKnown RBP16.76■□□□□ 0.27
CAPN1-213ENST00000527897 POU2F2P09086 479 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 PAX3P23760 479 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 SYKP43405 635 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 VCPP55072 806 aaKnown RBP16.76■□□□□ 0.27
CAPN1-213ENST00000527897 DUSP4Q13115 394 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 SLC39A12Q504Y0 691 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 WSCD1Q658N2 575 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 IQCEQ6IPM2 695 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 PARM1Q6UWI2 310 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 SLC44A3Q8N4M1 653 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 C1orf127Q8N9H9 656 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 FSIP1Q8NA03 581 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 MCRS1Q96EZ8 462 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 ANKRD36BP1Q96IX9 119 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 ZNF512Q96ME7 567 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-213ENST00000527897 SCAND2PQ9GZW5 306 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-213ENST00000527897 AGPAT3Q9NRZ7 376 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 DSEQ9UL01 958 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 SLC27A5Q9Y2P5 690 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 YIPF1Q9Y548 306 aa16.76■□□□□ 0.27
CAPN1-213ENST00000527897 ZDBF2Q9HCK1 2354 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 UBE4BO95155 1302 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 STK25O00506 426 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 TGFB1I1O43294 461 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 TNNC2P02585 160 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 MYL4P12829 197 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 CEBPBP17676 345 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 RFX1P22670 979 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 PNPLA4P41247 253 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 NDUFA8P51970 172 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 EHHADHQ08426 723 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 GPR17Q13304 367 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 HTR4Q13639 388 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 MYBPC2Q14324 1141 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 SLC5A9Q2M3M2 681 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 PDZD4Q76G19 769 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-213ENST00000527897 HS2ST1Q7LGA3 356 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 NPAS3Q8IXF0 933 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 HS6ST3Q8IZP7 471 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 THEM5Q8N1Q8 247 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 ATAD1Q8NBU5 361 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 FLCNQ8NFG4 579 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 FGF14Q92915 247 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 TCEAL4Q96EI5 215 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 RPP25Q9BUL9 199 aaKnown RBP16.75■□□□□ 0.27
CAPN1-213ENST00000527897 ZFP37Q9Y6Q3 630 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-213ENST00000527897 ZNF318Q5VUA4 2279 aa16.75■□□□□ 0.27
CAPN1-213ENST00000527897 MTMR11A4FU01 709 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 SOAT2O75908 522 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 CYP11A1P05108 521 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 DLATP10515 647 aaKnown RBP16.74■□□□□ 0.27
CAPN1-213ENST00000527897 ALDH1A3P47895 512 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 KMT5BQ4FZB7 885 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 IER5LQ5T953 404 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 CYP4A22Q5TCH4 519 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 SCARA3Q6AZY7 606 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 MTSS1LQ765P7 747 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 SIX5Q8N196 739 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 TTC9BQ8N6N2 239 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 OR5B17Q8NGF7 314 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 OR10T2Q8NGX3 314 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 NXPE3Q969Y0 559 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 SEPT5Q99719 369 aaPredicted RBP16.74■□□□□ 0.27
CAPN1-213ENST00000527897 KXD1Q9BQD3 176 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 CRISPLD1Q9H336 500 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 KIAA1586Q9HCI6 787 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 CEP72Q9P209 647 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 USP25Q9UHP3 1055 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 ITGA11Q9UKX5 1188 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 CA14Q9ULX7 337 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 MAFFQ9ULX9 164 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms