RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 DIS3L2Q8IYB7 885 aaKnown RBP13.43□□□□□ -0.26
SRPRA-202ENST00000527817 TTC8Q8TAM2 541 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 ZFYVE19Q96K21 471 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 TMEM209Q96SK2 561 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 TCHPQ9BT92 498 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 TARS2Q9BW92 718 aaKnown RBP13.43□□□□□ -0.26
SRPRA-202ENST00000527817 RBM19Q9Y4C8 960 aaKnown RBP13.43□□□□□ -0.26
SRPRA-202ENST00000527817 OR6C75A6NL08 312 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 CCDC169A6NNP5 214 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 MEFVO15553 781 aaPredicted RBP13.42□□□□□ -0.26
SRPRA-202ENST00000527817 PEX3P56589 373 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 CACNB1Q02641 598 aaPredicted RBP13.42□□□□□ -0.26
SRPRA-202ENST00000527817 ECM1Q16610 540 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 SLC10A6Q3KNW5 377 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 ITPRIPL2Q3MIP1 535 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 ARHGAP15Q53QZ3 475 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 STXBP5Q5T5C0 1151 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 CENPPQ6IPU0 288 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 MPZL3Q6UWV2 235 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 CAMKK1Q8N5S9 505 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 KDF1Q8NAX2 398 aaPredicted RBP13.42□□□□□ -0.26
SRPRA-202ENST00000527817 BPIFB1Q8TDL5 484 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 BHMT2Q9H2M3 363 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 CRISPLD1Q9H336 500 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 ATXN3LQ9H3M9 355 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 VPS45Q9NRW7 570 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 THG1LQ9NWX6 298 aaKnown RBP13.42□□□□□ -0.26
SRPRA-202ENST00000527817 ARHGAP28Q9P2N2 729 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 HSFX1Q9UBD0 423 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 SLC8A2Q9UPR5 921 aa13.42□□□□□ -0.26
SRPRA-202ENST00000527817 ATG2BQ96BY7 2078 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 ANKRD11Q6UB99 2663 aaPredicted RBP13.41□□□□□ -0.26
SRPRA-202ENST00000527817 CCDC192P0DO97 292 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 LRPAP1P30533 357 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 MPLP40238 635 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 PXNP49023 591 aaPredicted RBP13.41□□□□□ -0.26
SRPRA-202ENST00000527817 AARSP49588 968 aaKnown RBP eCLIP13.41□□□□□ -0.26
SRPRA-202ENST00000527817 TNK2Q07912 1038 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 ORC2Q13416 577 aaPredicted RBP13.41□□□□□ -0.26
SRPRA-202ENST00000527817 COL9A2Q14055 689 aaPredicted RBP13.41□□□□□ -0.26
SRPRA-202ENST00000527817 MYBPC2Q14324 1141 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 ANKRD1Q15327 319 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 TMEM196Q5HYL7 178 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 GPR158Q5T848 1215 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 RNF43Q68DV7 783 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 PSMG2Q969U7 264 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 ZBTB45Q96K62 511 aaPredicted RBP13.41□□□□□ -0.26
SRPRA-202ENST00000527817 NTPCRQ9BSD7 190 aaKnown RBP13.41□□□□□ -0.26
SRPRA-202ENST00000527817 TASP1Q9H6P5 420 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 PLEKHA5Q9HAU0 1116 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 SLC27A5Q9Y2P5 690 aa13.41□□□□□ -0.26
SRPRA-202ENST00000527817 TIMM13Q9Y5L4 95 aaPredicted RBP13.41□□□□□ -0.26
SRPRA-202ENST00000527817 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.41□□□□□ -0.26
SRPRA-202ENST00000527817 SPEGQ15772 3267 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 TRDMT1O14717 391 aaKnown RBP13.4□□□□□ -0.26
SRPRA-202ENST00000527817 OR4Q2P0C623 313 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 OR52Z1P0C646 297 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 CYP3A5P20815 502 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 GABRR2P28476 465 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 CCT6AP40227 531 aaKnown RBP13.4□□□□□ -0.26
SRPRA-202ENST00000527817 GRSF1Q12849 480 aaKnown RBP eCLIP13.4□□□□□ -0.26
SRPRA-202ENST00000527817 TRIM29Q14134 588 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 ZBTB6Q15916 424 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 PLK5Q496M5 336 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 HAUS3Q68CZ6 603 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 PKN3Q6P5Z2 889 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 UNQ6494/PRO21346Q6UXR6 183 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 USP37Q86T82 979 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 ITIH5Q86UX2 942 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 DAW1Q8N136 415 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 PGLYRP2Q96PD5 576 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 SMOC1Q9H4F8 434 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 C17orf75Q9HAS0 396 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 KMT5AQ9NQR1 393 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 GKN1Q9NS71 199 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 ZMYM5Q9UJ78 669 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 ZMIZ1Q9ULJ6 1067 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 KIAA1024Q9UPX6 916 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 IGF2RP11717 2491 aa13.4□□□□□ -0.26
SRPRA-202ENST00000527817 MTMR11A4FU01 709 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 C1QTNF9BB2RNN3 333 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 TOM1L1O75674 476 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 C1QTNF9P0C862 333 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 TYMPP19971 482 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 MCM2P49736 904 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 DMP1Q13316 513 aaPredicted RBP13.39□□□□□ -0.27
SRPRA-202ENST00000527817 PDIA5Q14554 519 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 ZNF174Q15697 407 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 FSTL4Q6MZW2 842 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 PSAPL1Q6NUJ1 521 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 ATAD1Q8NBU5 361 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 NSUN7Q8NE18 718 aaKnown RBP13.39□□□□□ -0.27
SRPRA-202ENST00000527817 FAM83CQ9BQN1 747 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 DUSP15Q9H1R2 295 aaPredicted RBP13.39□□□□□ -0.27
SRPRA-202ENST00000527817 TUBGCP4Q9UGJ1 667 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 KCNG1Q9UIX4 513 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 WASF3Q9UPY6 502 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 STK24Q9Y6E0 443 aa13.39□□□□□ -0.27
SRPRA-202ENST00000527817 TTC26A0AVF1 554 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 HIP1RO75146 1068 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms