RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 HOXC13P31276 330 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 GALCP54803 685 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 PPATQ06203 517 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 MAP2K5Q13163 448 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 R3HDM1Q15032 1099 aaKnown RBP7.9□□□□□ -1.15
SOX6-208ENST00000527619 PCSK7Q16549 785 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 OLFML2BQ68BL8 750 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 NXNQ6DKJ4 435 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 DUS1LQ6P1R4 473 aaKnown RBP7.9□□□□□ -1.15
SOX6-208ENST00000527619 TTC27Q6P3X3 843 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 CCDC137Q6PK04 289 aaKnown RBP7.9□□□□□ -1.15
SOX6-208ENST00000527619 RGS9BPQ6ZS82 235 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 EPM2AIP1Q7L775 607 aaPredicted RBP7.9□□□□□ -1.15
SOX6-208ENST00000527619 DGLUCYQ7Z3D6 616 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 SRRM1Q8IYB3 904 aaKnown RBP7.9□□□□□ -1.15
SOX6-208ENST00000527619 RIBC1Q8N443 379 aaPredicted RBP7.9□□□□□ -1.15
SOX6-208ENST00000527619 PRELID2Q8N945 189 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 DAGLBQ8NCG7 672 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 GLIS3Q8NEA6 775 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 APPL2Q8NEU8 664 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.9□□□□□ -1.15
SOX6-208ENST00000527619 SLC35G2Q8TBE7 412 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 U2AF1L4Q8WU68 220 aaKnown RBP7.9□□□□□ -1.15
SOX6-208ENST00000527619 IPCEF1Q8WWN9 437 aaPredicted RBP7.9□□□□□ -1.15
SOX6-208ENST00000527619 NLRP7Q8WX94 980 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 RFFLQ8WZ73 363 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 LARP4BQ92615 738 aaKnown RBP7.9□□□□□ -1.15
SOX6-208ENST00000527619 GPKOWQ92917 476 aaPredicted RBP eCLIP7.9□□□□□ -1.15
SOX6-208ENST00000527619 OSGEPQ9NPF4 335 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 BLOC1S4Q9NUP1 217 aa7.9□□□□□ -1.15
SOX6-208ENST00000527619 FAM32AQ9Y421 112 aaKnown RBP7.9□□□□□ -1.15
SOX6-208ENST00000527619 BAZ2BQ9UIF8 2168 aaKnown RBP7.9□□□□□ -1.15
SOX6-208ENST00000527619 SMIM31A0A1B0GVY4 71 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 A0A1W2PQ67 120 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 FAM47DPA6NHR8 397 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 A8MXQ7 604 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 C19orf81C9J6K1 198 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 ANKRD63C9JTQ0 380 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 GSC2O15499 205 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 EDF1O60869 148 aaKnown RBP7.89□□□□□ -1.15
SOX6-208ENST00000527619 PDE8BO95263 885 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 ASMTLO95671 621 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 GGPS1O95749 300 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 PYGMP11217 842 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 UCHL3P15374 230 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 CHKAP35790 457 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 TECP42680 631 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 WDR4P57081 412 aaKnown RBP7.89□□□□□ -1.15
SOX6-208ENST00000527619 TBL3Q12788 808 aaKnown RBP7.89□□□□□ -1.15
SOX6-208ENST00000527619 KCNH2Q12809 1159 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 CALCOCO2Q13137 446 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 GRB10Q13322 594 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 E2F2Q14209 437 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 TNIP1Q15025 636 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 EXOC3L4Q17RC7 722 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 C6orf183Q5T699 404 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 TMEM164Q5U3C3 297 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 ZNF746Q6NUN9 644 aaPredicted RBP7.89□□□□□ -1.15
SOX6-208ENST00000527619 IZUMO2Q6UXV1 221 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 BRSK2Q8IWQ3 736 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 ANKRD35Q8N283 1001 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 NPLOC4Q8TAT6 608 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 ECSITQ9BQ95 431 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 ISCA1Q9BUE6 129 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 CAPN10Q9HC96 672 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 ARHGEF38Q9NXL2 777 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 PTTG2Q9NZH5 202 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 NDUFA13Q9P0J0 144 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 USP21Q9UK80 565 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 MKL2Q9ULH7 1088 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 ZNF711Q9Y462 761 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 ARPC4-TTLL3A0A0A6YYG9 625 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 LOC105371267A0A1B0GV96 52 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 BTBD19C9JJ37 291 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 C2CD2LO14523 706 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 TMEM253P0C7T8 217 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 GLULP15104 373 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 MUTP22033 750 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 POLD2P49005 469 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 CENPAP49450 140 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 MRPL28Q13084 256 aaKnown RBP7.89□□□□□ -1.15
SOX6-208ENST00000527619 ITGA9Q13797 1035 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 CTC1Q2NKJ3 1217 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 ZNF772Q68DY9 489 aaPredicted RBP7.89□□□□□ -1.15
SOX6-208ENST00000527619 DPY19L2P1Q6NXN4 242 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 CLNKQ7Z7G1 428 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 CYP4X1Q8N118 509 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 GALNT6Q8NCL4 622 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 SVIPQ8NHG7 77 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 MCUR1Q96AQ8 359 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 NELL2Q99435 816 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.89□□□□□ -1.15
SOX6-208ENST00000527619 GBA3Q9H227 469 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 EPB41L1Q9H4G0 881 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 KANSL2Q9H9L4 492 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 BTG4Q9NY30 223 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 CCPG1Q9ULG6 757 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 WASF2Q9Y6W5 498 aa7.89□□□□□ -1.15
SOX6-208ENST00000527619 GYG2O15488 501 aa7.88□□□□□ -1.15
SOX6-208ENST00000527619 CCNT1O60563 726 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms