RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SMC6Q96SB8 1091 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 IWS1Q96ST2 819 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 RIT2Q99578 217 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 KIFC3Q9BVG8 833 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 TRABDQ9H4I3 376 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 TMEM8AQ9HCN3 771 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 NKX1-2Q9UD57 310 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-208ENST00000527323 EXOC7Q9UPT5 735 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 CSADQ9Y600 493 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 CCDC189A1A4V9 331 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 CA4P22748 312 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 SSTR3P32745 418 aaPredicted RBP13.23□□□□□ -0.29
CAPN1-208ENST00000527323 SLC1A1P43005 524 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 RAD23BP54727 409 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 CENPCQ03188 943 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 ACVR2BQ13705 512 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 HHATQ5VTY9 493 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 SNRNP48Q6IEG0 339 aaKnown RBP13.23□□□□□ -0.29
CAPN1-208ENST00000527323 LONP2Q86WA8 852 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 ANKLE1Q8NAG6 615 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 CHURC1Q8WUH1 139 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 NAF1Q96HR8 494 aaKnown RBP13.23□□□□□ -0.29
CAPN1-208ENST00000527323 OSBPL8Q9BZF1 889 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 KIF9Q9HAQ2 790 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 KCNH7Q9NS40 1196 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.23□□□□□ -0.29
CAPN1-208ENST00000527323 ZNF148Q9UQR1 794 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 ZNF536O15090 1300 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 LUC7L3O95232 432 aaKnown RBP13.23□□□□□ -0.29
CAPN1-208ENST00000527323 MAPTP10636 758 aaKnown RBP13.23□□□□□ -0.29
CAPN1-208ENST00000527323 ITGB5P18084 799 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 CNGA1P29973 690 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 QARSP47897 775 aaKnown RBP13.23□□□□□ -0.29
CAPN1-208ENST00000527323 CCNHP51946 323 aaPredicted RBP13.23□□□□□ -0.29
CAPN1-208ENST00000527323 GTF2BQ00403 316 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 CCNG2Q16589 344 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 SUPT20HL1Q3ZLR7 823 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 XKR9Q5GH70 373 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 AGGF1Q8N302 714 aaeCLIP13.23□□□□□ -0.29
CAPN1-208ENST00000527323 ARMC2Q8NEN0 867 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 POMGNT1Q8WZA1 660 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 DDX1Q92499 740 aaKnown RBP13.23□□□□□ -0.29
CAPN1-208ENST00000527323 UTP4Q969X6 686 aaKnown RBP13.23□□□□□ -0.29
CAPN1-208ENST00000527323 DDX27Q96GQ7 796 aaKnown RBP13.23□□□□□ -0.29
CAPN1-208ENST00000527323 NUDCD1Q96RS6 583 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 MOV10L1Q9BXT6 1211 aaKnown RBP13.23□□□□□ -0.29
CAPN1-208ENST00000527323 KLHL11Q9NVR0 708 aa13.23□□□□□ -0.29
CAPN1-208ENST00000527323 GRIN3BO60391 1043 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 CETN2P41208 172 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 CCDC15Q0P6D6 951 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 SEPT7Q16181 437 aaKnown RBP13.22□□□□□ -0.29
CAPN1-208ENST00000527323 PKN2Q16513 984 aaKnown RBP13.22□□□□□ -0.29
CAPN1-208ENST00000527323 SV2AQ7L0J3 742 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 PASD1Q8IV76 773 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.22□□□□□ -0.292e-9■□□□□ 10
CAPN1-208ENST00000527323 FAM81BQ96LP2 452 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 KIAA1683Q9H0B3 1180 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 CHKBQ9Y259 395 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 STARD13Q9Y3M8 1113 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 NEU2Q9Y3R4 380 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 ACTL7BQ9Y614 415 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 MROH7Q68CQ1 1323 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 PI4K2BG5E9Z4 385 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 MYCNP04198 464 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-208ENST00000527323 YWHABP31946 246 aaKnown RBP13.22□□□□□ -0.29
CAPN1-208ENST00000527323 GPC3P51654 580 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 TMEM63BQ5T3F8 832 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 RHOT1Q8IXI2 618 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 MAML1Q92585 1016 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 TAAR1Q96RJ0 339 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 C11orf70Q9BRQ4 267 aa13.22□□□□□ -0.29
CAPN1-208ENST00000527323 DCTN3O75935 186 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 CBX6O95503 412 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 ZSCAN5DPP0CG00 497 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 CALB2P22676 271 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 ADSSP30520 456 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 LIN9Q5TKA1 542 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 USP37Q86T82 979 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 TRABD2AQ86V40 505 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-208ENST00000527323 OPTNQ96CV9 577 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 YIPF3Q9GZM5 350 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 RNPEPL1Q9HAU8 725 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 DENND3A2RUS2 1198 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 WDR91A4D1P6 747 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 PPP1R12AO14974 1030 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-208ENST00000527323 SMNDC1O75940 238 aaKnown RBP eCLIP13.21□□□□□ -0.29
CAPN1-208ENST00000527323 UPP2O95045 317 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 ASMTLO95671 621 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 ATF7P17544 494 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-208ENST00000527323 RASSF2P50749 326 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 RPS6P62753 249 aaKnown RBP13.21□□□□□ -0.29
CAPN1-208ENST00000527323 PLCB3Q01970 1234 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 NR1H3Q13133 447 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 PCNX4Q63HM2 1172 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 PLA2G4FQ68DD2 849 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 TBC1D10AQ9BXI6 508 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 OSBPL1AQ9BXW6 950 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 KIAA1586Q9HCI6 787 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 C1orf112Q9NSG2 853 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms