RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 CRISPLD1Q9H336 500 aa17.53■□□□□ 0.4
PTPRU-210ENST00000527027 UBQLN1Q9UMX0 589 aaKnown RBP17.53■□□□□ 0.4
PTPRU-210ENST00000527027 SLC38A8A6NNN8 435 aa17.52■□□□□ 0.4
PTPRU-210ENST00000527027 CHURC1-FNTBB4DL54 471 aa17.52■□□□□ 0.4
PTPRU-210ENST00000527027 HRO43593 1189 aa17.52■□□□□ 0.4
PTPRU-210ENST00000527027 PAPSS2O95340 614 aaPredicted RBP17.52■□□□□ 0.4
PTPRU-210ENST00000527027 MATR3P43243 847 aaKnown RBP eCLIP17.52■□□□□ 0.4
PTPRU-210ENST00000527027 FNTBP49356 437 aa17.52■□□□□ 0.4
PTPRU-210ENST00000527027 ZRSR1Q15695 479 aaKnown RBP17.52■□□□□ 0.4
PTPRU-210ENST00000527027 CENPPQ6IPU0 288 aa17.52■□□□□ 0.4
PTPRU-210ENST00000527027 DSTYKQ6XUX3 929 aa17.52■□□□□ 0.4
PTPRU-210ENST00000527027 GPIHBP1Q8IV16 184 aa17.52■□□□□ 0.4
PTPRU-210ENST00000527027 ARID3BQ8IVW6 561 aaPredicted RBP17.52■□□□□ 0.4
PTPRU-210ENST00000527027 SYT2Q8N9I0 419 aaPredicted RBP17.52■□□□□ 0.4
PTPRU-210ENST00000527027 NETO1Q8TDF5 533 aa17.52■□□□□ 0.4
PTPRU-210ENST00000527027 RBM12Q9NTZ6 932 aaKnown RBP17.52■□□□□ 0.4
PTPRU-210ENST00000527027 SLC27A5Q9Y2P5 690 aa17.52■□□□□ 0.4
PTPRU-210ENST00000527027 ASB3Q9Y575 518 aa17.52■□□□□ 0.4
PTPRU-210ENST00000527027 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.52■□□□□ 0.4
PTPRU-210ENST00000527027 KMT2BQ9UMN6 2715 aaPredicted RBP17.51■□□□□ 0.39
PTPRU-210ENST00000527027 MYBPHLA2RUH7 354 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 LACTBL1A8MY62 500 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 SPECC1L-ADORA2AF8WAN1 911 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 SLC30A4O14863 429 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 XPOTO43592 962 aaKnown RBP17.51■□□□□ 0.39
PTPRU-210ENST00000527027 SEC24BO95487 1268 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 TYMPP19971 482 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 SOX9P48436 509 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 DMWDQ09019 674 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 MYBPC2Q14324 1141 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 KYAT1Q16773 422 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 DGKKQ5KSL6 1271 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 HYIQ5T013 277 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 STXBP5Q5T5C0 1151 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 OVOS1Q6IE37 1185 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 DNAJB7Q7Z6W7 309 aaPredicted RBP17.51■□□□□ 0.39
PTPRU-210ENST00000527027 LONP2Q86WA8 852 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 RALGPS2Q86X27 583 aaPredicted RBP17.51■□□□□ 0.39
PTPRU-210ENST00000527027 LRRC3BQ96PB8 259 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 TSPAN18Q96SJ8 248 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.51■□□□□ 0.39
PTPRU-210ENST00000527027 SEMA4GQ9NTN9 838 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 KCND2Q9NZV8 630 aa17.51■□□□□ 0.39
PTPRU-210ENST00000527027 MTMR11A4FU01 709 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 H0YCG3 227 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 K7ESF4 209 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 DPYSL4O14531 572 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 FGF19O95750 216 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 TNFSF9P41273 254 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 SLC12A3P55017 1021 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 PPP2R3AQ06190 1150 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 CSRP2Q16527 193 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 ARHGAP29Q52LW3 1261 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 ARMCX5Q6P1M9 558 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 TXNDC11Q6PKC3 985 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 GAREM2Q75VX8 874 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 ATAD1Q8NBU5 361 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 PSMG2Q969U7 264 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 BICD1Q96G01 975 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 PNMA5Q96PV4 448 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 MKNK1Q9BUB5 465 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 ATXN3LQ9H3M9 355 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 SH2B1Q9NRF2 756 aaPredicted RBP17.5■□□□□ 0.39
PTPRU-210ENST00000527027 OBP2AQ9NY56 170 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 LARSQ9P2J5 1176 aaKnown RBP17.5■□□□□ 0.39
PTPRU-210ENST00000527027 CITO14578 2027 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 COL4A2P08572 1712 aa17.5■□□□□ 0.39
PTPRU-210ENST00000527027 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-210ENST00000527027 KRT37O76014 449 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 ADRB1P08588 477 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 PLA2G4BP0C869 781 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 PAX3P23760 479 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 CTHP32929 405 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 GUCY2FP51841 1108 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 NCKAP1LP55160 1127 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 SRSF5Q13243 272 aaKnown RBP17.49■□□□□ 0.39
PTPRU-210ENST00000527027 WDR44Q5JSH3 913 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 Q6ZS52 159 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 HAUS6Q7Z4H7 955 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-210ENST00000527027 ITIH5Q86UX2 942 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 TTC8Q8TAM2 541 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 FAM200AQ8TCP9 573 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 KCNN1Q92952 543 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 SENP8Q96LD8 212 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 PLIN2Q99541 437 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 RPF1Q9H9Y2 349 aaKnown RBP17.49■□□□□ 0.39
PTPRU-210ENST00000527027 HSFX1Q9UBD0 423 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 CHD8Q9HCK8 2581 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 TICRRQ7Z2Z1 1910 aa17.49■□□□□ 0.39
PTPRU-210ENST00000527027 NPHP3-ACAD11A0A0J9YXS1 232 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 OGTO15294 1046 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 FOXD2O60548 495 aaPredicted RBP17.48■□□□□ 0.39
PTPRU-210ENST00000527027 ADRB2P07550 413 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 GABRR2P28476 465 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 WEE1P30291 646 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 HOXA6P31267 233 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 LIG4P49917 911 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 LILRA4P59901 499 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 ATP2C1P98194 919 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms