RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 PLCB1Q9NQ66 1216 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 CHST7Q9NS84 486 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 NXF1Q9UBU9 619 aaKnown RBP17.72■□□□□ 0.43
CAPN1-205ENST00000526954 SOX1O00570 391 aaPredicted RBP17.71■□□□□ 0.43
CAPN1-205ENST00000526954 CBFA2T2O43439 604 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 HUS1O60921 280 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 TACC1O75410 805 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 TPM3P06753 285 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 ASPAP45381 313 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 GPM6BQ13491 265 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 SYCP1Q15431 976 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 SOWAHAQ2M3V2 549 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 PHLDB3Q6NSJ2 640 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 TAS1R1Q7RTX1 841 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 VPS52Q8N1B4 723 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 APPL2Q8NEU8 664 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 ARNTL2Q8WYA1 636 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 ELMO3Q96BJ8 720 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 FAM81BQ96LP2 452 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 TTPALQ9BTX7 342 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 XPO4Q9C0E2 1151 aaKnown RBP17.71■□□□□ 0.43
CAPN1-205ENST00000526954 ZBP1Q9H171 429 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 CYP3A43Q9HB55 503 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 ALG13Q9NP73 1137 aaKnown RBP17.71■□□□□ 0.43
CAPN1-205ENST00000526954 APEX2Q9UBZ4 518 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 L1RE1Q9UN81 338 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 POLIQ9UNA4 740 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 CHD7Q9P2D1 2997 aa17.71■□□□□ 0.43
CAPN1-205ENST00000526954 FSD2A1L4K1 749 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 GABRDO14764 452 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 GRM6O15303 877 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 AP5Z1O43299 807 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 OAZ2O95190 189 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 TBXAS1P24557 533 aaPredicted RBP17.7■□□□□ 0.42
CAPN1-205ENST00000526954 TKTP29401 623 aaKnown RBP17.7■□□□□ 0.42
CAPN1-205ENST00000526954 PBX1P40424 430 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 DSG1Q02413 1049 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 GCNT1Q02742 428 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 MRPL58Q14197 206 aaKnown RBP17.7■□□□□ 0.42
CAPN1-205ENST00000526954 KLHDC7AQ5VTJ3 777 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 KIAA0319Q5VV43 1072 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 WSCD1Q658N2 575 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 SMYD5Q6GMV2 418 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 PDCL2Q8N4E4 241 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 MMS19Q96T76 1030 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 LMAN2LQ9H0V9 348 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 CERS4Q9HA82 394 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.7■□□□□ 0.421e-7■■■■■ 67.7
CAPN1-205ENST00000526954 DAAM1Q9Y4D1 1078 aa17.7■□□□□ 0.42
CAPN1-205ENST00000526954 COL4A4P53420 1690 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-205ENST00000526954 EPOPA6NHQ4 379 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 CLSTN1O94985 981 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 CTSAP10619 480 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 WARSP23381 471 aaKnown RBP17.69■□□□□ 0.42
CAPN1-205ENST00000526954 DNAJB1P25685 340 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 GLUD2P49448 558 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 LRMPQ12912 555 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 CUL2Q13617 745 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 CAMK1Q14012 370 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 RTP2Q5QGT7 225 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 PDE12Q6L8Q7 609 aaKnown RBP17.69■□□□□ 0.42
CAPN1-205ENST00000526954 PDXDC1Q6P996 788 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 ENOSF1Q7L5Y1 443 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 METTL23Q86XA0 190 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 ARHGEF19Q8IW93 802 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 PPM1KQ8N3J5 372 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 POF1BQ8WVV4 589 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 KBTBD7Q8WVZ9 684 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 PIK3R5Q8WYR1 880 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 JAKMIP2Q96AA8 810 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 LSM14BQ9BX40 385 aaKnown RBP17.69■□□□□ 0.42
CAPN1-205ENST00000526954 SDCBP2Q9H190 292 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 TLR9Q9NR96 1032 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 FBXL5Q9UKA1 691 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 SSX2IPQ9Y2D8 614 aa17.69■□□□□ 0.42
CAPN1-205ENST00000526954 TIMM13Q9Y5L4 95 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-205ENST00000526954 FSCN2O14926 492 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 LILRB3O75022 631 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 NOL4O94818 638 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 RFX1P22670 979 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 LHX1P48742 406 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 KLK7P49862 253 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 PLCB2Q00722 1185 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 APBA1Q02410 837 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 YWHAHQ04917 246 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-205ENST00000526954 MYO9BQ13459 2157 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 BMS1Q14692 1282 aaKnown RBP17.68■□□□□ 0.42
CAPN1-205ENST00000526954 VARS2Q5ST30 1063 aaKnown RBP17.68■□□□□ 0.42
CAPN1-205ENST00000526954 OVOS1Q6IE37 1185 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 KIAA1841Q6NSI8 718 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 GPR153Q6NV75 609 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 ANKS3Q6ZW76 656 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 CEP57Q86XR8 500 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 ADGRF2Q8IZF7 708 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 TTC39CQ8N584 583 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 LNX1Q8TBB1 728 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-205ENST00000526954 B3GALT6Q96L58 329 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 OXCT2Q9BYC2 517 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-205ENST00000526954 TRIM5Q9C035 493 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 GANQ9H2C0 597 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms