RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 TMCO2Q7Z6W1 182 aaPredicted RBP15.42■□□□□ 0.06
COLCA2-202ENST00000526216 SLC47A2Q86VL8 602 aa15.42■□□□□ 0.06
COLCA2-202ENST00000526216 COLGALT2Q8IYK4 626 aa15.42■□□□□ 0.06
COLCA2-202ENST00000526216 RBBP8NLQ8NC74 664 aaPredicted RBP15.42■□□□□ 0.06
COLCA2-202ENST00000526216 EPS8L1Q8TE68 723 aa15.42■□□□□ 0.06
COLCA2-202ENST00000526216 ATRIPQ8WXE1 791 aa15.42■□□□□ 0.06
COLCA2-202ENST00000526216 DDX1Q92499 740 aaKnown RBP15.42■□□□□ 0.06
COLCA2-202ENST00000526216 ZNF560Q96MR9 790 aa15.42■□□□□ 0.06
COLCA2-202ENST00000526216 MRPL45Q9BRJ2 306 aaKnown RBP15.42■□□□□ 0.06
COLCA2-202ENST00000526216 SPTLC3Q9NUV7 552 aa15.42■□□□□ 0.06
COLCA2-202ENST00000526216 GDAP2Q9NXN4 497 aa15.42■□□□□ 0.06
COLCA2-202ENST00000526216 DNAJB4Q9UDY4 337 aa15.42■□□□□ 0.06
COLCA2-202ENST00000526216 LRFN2Q9ULH4 789 aa15.42■□□□□ 0.06
COLCA2-202ENST00000526216 SNX9Q9Y5X1 595 aa15.42■□□□□ 0.06
COLCA2-202ENST00000526216 TSC2P49815 1807 aa15.42■□□□□ 0.06
COLCA2-202ENST00000526216 ABHD14A-ACY1A0A1B0GW23 586 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 DDX3XO00571 662 aaKnown RBP eCLIP15.41■□□□□ 0.06
COLCA2-202ENST00000526216 HCRTO43612 131 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 ITGB1P05556 798 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 KRT5P13647 590 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 SYN1P17600 705 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 RPL9P32969 192 aaKnown RBP15.41■□□□□ 0.06
COLCA2-202ENST00000526216 AARSP49588 968 aaKnown RBP eCLIP15.41■□□□□ 0.06
COLCA2-202ENST00000526216 KIF11P52732 1056 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 TNNC1P63316 161 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 INCA1Q0VD86 236 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 MYO1EQ12965 1108 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 SOWAHAQ2M3V2 549 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 SV2CQ496J9 727 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 TMEM270Q6UE05 265 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 ZSCAN30Q86W11 494 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 OSTM1Q86WC4 334 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 URGCPQ8TCY9 931 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 KBTBD7Q8WVZ9 684 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 ZSWIM1Q9BR11 485 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 ELOVL4Q9GZR5 314 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 NRDE2Q9H7Z3 1164 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 CYP3A43Q9HB55 503 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 RC3H2Q9HBD1 1191 aaKnown RBP15.41■□□□□ 0.06
COLCA2-202ENST00000526216 ZMYND8Q9ULU4 1186 aaPredicted RBP15.41■□□□□ 0.06
COLCA2-202ENST00000526216 L1RE1Q9UN81 338 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 ADGRG1Q9Y653 693 aa15.41■□□□□ 0.06
COLCA2-202ENST00000526216 EPN1Q9Y6I3 576 aaPredicted RBP15.41■□□□□ 0.06
COLCA2-202ENST00000526216 A0A087X0T9 212 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 USP27XA6NNY8 438 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 KPNA7A9QM74 516 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 EIF3CLB5ME19 914 aaKnown RBP15.4■□□□□ 0.06
COLCA2-202ENST00000526216 CILPO75339 1184 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 UPP2O95045 317 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 KIF4AO95239 1232 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 NDUFA10O95299 355 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 PFKMP08237 780 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 FAM228BP0C875 321 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 CYP11B1P15538 503 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 PNPLA4P41247 253 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 ORC1Q13415 861 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 PALB2Q86YC2 1186 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 CCDC170Q8IYT3 715 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 RPUSD2Q8IZ73 545 aaKnown RBP15.4■□□□□ 0.06
COLCA2-202ENST00000526216 SLC30A5Q8TAD4 765 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 TOP1MTQ969P6 601 aa15.4■□□□□ 0.06
COLCA2-202ENST00000526216 EIF3CQ99613 913 aaKnown RBP15.4■□□□□ 0.06
COLCA2-202ENST00000526216 R3HCC1Q9Y3T6 440 aaKnown RBP15.4■□□□□ 0.06
COLCA2-202ENST00000526216 TBKBP1A7MCY6 615 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 I3L4J1 428 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 DGKIO75912 1065 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 LCA5LO95447 670 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 CFHP08603 1231 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 P4HA1P13674 534 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 BRCC3P46736 316 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 RAD23BP54727 409 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 FMO1Q01740 532 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 FPGSQ05932 587 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 GFPT1Q06210 699 aaPredicted RBP15.39■□□□□ 0.05
COLCA2-202ENST00000526216 PPIGQ13427 754 aaKnown RBP eCLIP15.39■□□□□ 0.052e-6■■□□□ 12.8
COLCA2-202ENST00000526216 PAN2Q504Q3 1202 aaKnown RBP15.39■□□□□ 0.05
COLCA2-202ENST00000526216 TIGD5Q53EQ6 642 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 ZNF394Q53GI3 561 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 TMEM240Q5SV17 173 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 TAF3Q5VWG9 929 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 ZNF365Q70YC5 407 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 OTOP2Q7RTS6 562 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 DNAAF5Q86Y56 855 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 SLC4A11Q8NBS3 891 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 HASPINQ8TF76 798 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 CCDC42Q96M95 316 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 UROC1Q96N76 676 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 MMS19Q96T76 1030 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 PCDHB18PQ96TA0 734 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 AGPAT1Q99943 283 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 TFR2Q9UP52 801 aa15.39■□□□□ 0.05
COLCA2-202ENST00000526216 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.39■□□□□ 0.05
COLCA2-202ENST00000526216 BZW2Q9Y6E2 419 aaKnown RBP15.39■□□□□ 0.05
COLCA2-202ENST00000526216 HOXA2O43364 376 aa15.38■□□□□ 0.05
COLCA2-202ENST00000526216 NRDCO43847 1150 aa15.38■□□□□ 0.05
COLCA2-202ENST00000526216 BAIAP3O94812 1187 aa15.38■□□□□ 0.05
COLCA2-202ENST00000526216 MMEP08473 750 aa15.38■□□□□ 0.05
COLCA2-202ENST00000526216 CYLC1P35663 651 aaPredicted RBP15.38■□□□□ 0.05
COLCA2-202ENST00000526216 SLC11A1P49279 550 aa15.38■□□□□ 0.05
COLCA2-202ENST00000526216 NDST1P52848 882 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms