RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 METTL23Q86XA0 190 aa19.91■□□□□ 0.78
TSPAN4-216ENST00000526055 LRRC52Q8N7C0 313 aa19.91■□□□□ 0.78
TSPAN4-216ENST00000526055 LEMD2Q8NC56 503 aa19.91■□□□□ 0.78
TSPAN4-216ENST00000526055 SCFD1Q8WVM8 642 aa19.91■□□□□ 0.78
TSPAN4-216ENST00000526055 PAGE5Q96GU1 130 aa19.91■□□□□ 0.78
TSPAN4-216ENST00000526055 PRRX2Q99811 253 aa19.91■□□□□ 0.78
TSPAN4-216ENST00000526055 PCIF1Q9H4Z3 704 aa19.91■□□□□ 0.78
TSPAN4-216ENST00000526055 HSPBP1Q9NZL4 362 aa19.91■□□□□ 0.78
TSPAN4-216ENST00000526055 A0A1B0GVL5 298 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 GOLGA8IPA6NC78 632 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 GOLGA8JA6NMD2 632 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 KPNA7A9QM74 516 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 CYB561D2O14569 222 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 ZNF197O14709 1029 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 RHOP08100 348 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 NTHL1P78549 312 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 SMARCB1Q12824 385 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 PLD1Q13393 1074 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 RNF19BQ6ZMZ0 732 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 MTSS1LQ765P7 747 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 C12orf56Q8IXR9 622 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 ZSWIM2Q8NEG5 633 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 GOLGA5Q8TBA6 731 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 FGF13Q92913 245 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 BORCS6Q96GS4 357 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 AGPAT3Q9NRZ7 376 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 GDE1Q9NZC3 331 aa19.9■□□□□ 0.78
TSPAN4-216ENST00000526055 TGFB1I1O43294 461 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 SYKP43405 635 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 NUBP1P53384 320 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 WNT7BP56706 349 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 NUCB2P80303 420 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 RBP5P82980 135 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 HTR4Q13639 388 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 IQCEQ6IPM2 695 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 THEM5Q8N1Q8 247 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 SLC44A3Q8N4M1 653 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 C1orf127Q8N9H9 656 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 SPATA18Q8TC71 538 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 ANKRD36BP1Q96IX9 119 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 PDE11AQ9HCR9 933 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 EXOC1Q9NV70 894 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 HCFC1R1Q9NWW0 138 aa19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 MRPS23Q9Y3D9 190 aaKnown RBP19.89■□□□□ 0.77
TSPAN4-216ENST00000526055 ZDBF2Q9HCK1 2354 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 SCN1AP35498 2009 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 KLRC4O43908 158 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 TMEM191BP0C7N4 346 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 SRFP11831 508 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 CASP1P29466 404 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 POLR2BP30876 1174 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 KNOP1Q1ED39 458 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 CSGALNACT2Q8N6G5 542 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 XXYLT1Q8NBI6 393 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 ITFG1Q8TB96 612 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 NOC3LQ8WTT2 800 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 C2orf15Q8WU43 125 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 ZNF512Q96ME7 567 aaPredicted RBP19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 SLC39A2Q9NP94 309 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 INTS13Q9NVM9 706 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 WNT16Q9UBV4 365 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 AGAP1Q9UPQ3 857 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 R3HCC1Q9Y3T6 440 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 PIEZO1Q92508 2521 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 DOCK6Q96HP0 2047 aa19.88■□□□□ 0.77
TSPAN4-216ENST00000526055 PRPF40AO75400 957 aaKnown RBP19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 ITGB3P05106 788 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 TWF1Q12792 350 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 SNRNP35Q16560 246 aaKnown RBP19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 DUOXA2Q1HG44 320 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 CYP4A22Q5TCH4 519 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 CENPPQ6IPU0 288 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 CBWD2Q8IUF1 395 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 WDR49Q8IV35 697 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 NPAS3Q8IXF0 933 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 NELFCDQ8IXH7 590 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 GRAMD1CQ8IYS0 662 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 TMEM86AQ8N2M4 240 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 CXorf38Q8TB03 319 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 TMEM174Q8WUU8 243 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 CCDC34Q96HJ3 373 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 ZCWPW1Q9H0M4 648 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 SMOC2Q9H3U7 446 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 GDAP2Q9NXN4 497 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 YIPF1Q9Y548 306 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 ASB3Q9Y575 518 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 NUMBLQ9Y6R0 609 aa19.87■□□□□ 0.77
TSPAN4-216ENST00000526055 MTMR11A4FU01 709 aa19.86■□□□□ 0.77
TSPAN4-216ENST00000526055 VNN2O95498 520 aa19.86■□□□□ 0.77
TSPAN4-216ENST00000526055 TNNC2P02585 160 aa19.86■□□□□ 0.77
TSPAN4-216ENST00000526055 OR4Q2P0C623 313 aa19.86■□□□□ 0.77
TSPAN4-216ENST00000526055 ALDH1A3P47895 512 aa19.86■□□□□ 0.77
TSPAN4-216ENST00000526055 NDUFA8P51970 172 aa19.86■□□□□ 0.77
TSPAN4-216ENST00000526055 EPHB3P54753 998 aa19.86■□□□□ 0.77
TSPAN4-216ENST00000526055 EPHA5P54756 1037 aa19.86■□□□□ 0.77
TSPAN4-216ENST00000526055 PRSS36Q5K4E3 855 aa19.86■□□□□ 0.77
TSPAN4-216ENST00000526055 WSCD1Q658N2 575 aa19.86■□□□□ 0.77
TSPAN4-216ENST00000526055 PDZD4Q76G19 769 aaPredicted RBP19.86■□□□□ 0.77
TSPAN4-216ENST00000526055 OR10T2Q8NGX3 314 aa19.86■□□□□ 0.77
TSPAN4-216ENST00000526055 RSAD2Q8WXG1 361 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms