RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 C1orf127Q8N9H9 656 aa13.87□□□□□ -0.19
TRAPPC4-205ENST00000525079 CACTINQ8WUQ7 758 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-205ENST00000525079 ING5Q8WYH8 240 aa13.87□□□□□ -0.19
TRAPPC4-205ENST00000525079 BORCS6Q96GS4 357 aa13.87□□□□□ -0.19
TRAPPC4-205ENST00000525079 MTMR12Q9C0I1 747 aa13.87□□□□□ -0.19
TRAPPC4-205ENST00000525079 AFF4Q9UHB7 1163 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-205ENST00000525079 INSL5Q9Y5Q6 135 aa13.87□□□□□ -0.19
TRAPPC4-205ENST00000525079 UBE4BO95155 1302 aa13.87□□□□□ -0.19
TRAPPC4-205ENST00000525079 PTPRJQ12913 1337 aa13.87□□□□□ -0.19
TRAPPC4-205ENST00000525079 ARHGEF37A1IGU5 675 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 OR6C75A6NL08 312 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 KPNA7A9QM74 516 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 KIAA0391O15091 583 aaKnown RBP13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 VNN2O95498 520 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 PDGFBP01127 241 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 RHOP08100 348 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 TMEM191BP0C7N4 346 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 PAX3P23760 479 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 BFSP1Q12934 665 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 TDGQ13569 410 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 KNOP1Q1ED39 458 aaKnown RBP13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 BMT2Q1RMZ1 405 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 SV2CQ496J9 727 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 PABPC1LQ4VXU2 614 aaKnown RBP13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 WSCD1Q658N2 575 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 KRBA2Q6ZNG9 492 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 METTL23Q86XA0 190 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 UBALD2Q8IYN6 164 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 KIAA0895Q8NCT3 520 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 OR5B17Q8NGF7 314 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 OR10T2Q8NGX3 314 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 ASIC4Q96FT7 647 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 CORO1BQ9BR76 489 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 CRISPLD1Q9H336 500 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 EPS15L1Q9UBC2 864 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 SLC27A5Q9Y2P5 690 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 TECTAO75443 2155 aa13.86□□□□□ -0.19
TRAPPC4-205ENST00000525079 TSC2P49815 1807 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 NARSO43776 548 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 ZNF202O95125 648 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 RPN1P04843 607 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 CYP11A1P05108 521 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 POU2F2P09086 479 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 PTPN2P17706 415 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 TWF1Q12792 350 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 DUSP4Q13115 394 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 GPR17Q13304 367 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 SNRNP35Q16560 246 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 SLC5A9Q2M3M2 681 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 RTL10Q7L3V2 364 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 HS2ST1Q7LGA3 356 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 HS6ST3Q8IZP7 471 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 XXYLT1Q8NBI6 393 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 ATAD1Q8NBU5 361 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 CXorf38Q8TB03 319 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 FGF13Q92913 245 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 CCDC127Q96BQ5 260 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 ANKRD36BP1Q96IX9 119 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 ZNF560Q96MR9 790 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 RTP3Q9BQQ7 232 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 KIAA1586Q9HCI6 787 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 INTS13Q9NVM9 706 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 CEP72Q9P209 647 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 IGSF9Q9P2J2 1179 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 SIX4Q9UIU6 781 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 CDH7Q9ULB5 785 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 MRPS23Q9Y3D9 190 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 NOTCH4Q99466 2003 aa13.85□□□□□ -0.19
TRAPPC4-205ENST00000525079 MTMR11A4FU01 709 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 SOAT2O75908 522 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 TNNC2P02585 160 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 DLATP10515 647 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 PNPLA4P41247 253 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 RBP5P82980 135 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 PSMD2Q13200 908 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 MYBPC2Q14324 1141 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 SURF1Q15526 300 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 SLC39A12Q504Y0 691 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 PARM1Q6UWI2 310 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 BMP8AQ7Z5Y6 402 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 THEM5Q8N1Q8 247 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 SLC44A3Q8N4M1 653 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 TTC9BQ8N6N2 239 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 TCEAL4Q96EI5 215 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 MCRS1Q96EZ8 462 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 MFSD14AQ96MC6 490 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 ZNF512Q96ME7 567 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 RPP25Q9BUL9 199 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 OXCT2Q9BYC2 517 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 ITGA11Q9UKX5 1188 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 DSEQ9UL01 958 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 HCN4Q9Y3Q4 1203 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 YIPF1Q9Y548 306 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 NUMBLQ9Y6R0 609 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 DOCK8Q8NF50 2099 aa13.84□□□□□ -0.19
TRAPPC4-205ENST00000525079 GOLGA6L4A6NEF3 574 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 NRG2O14511 850 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 EXOC3O60645 756 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 MYL4P12829 197 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms