RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 HSPA1BP0DMV9 641 aaKnown RBP6.05□□□□□ -1.44
USP47-204ENST00000525078 PTGS1P23219 599 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 KLRC1P26715 233 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 ABCD3P28288 659 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 ABCD1P33897 745 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 SLC6A9P48067 706 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 KCNC1P48547 511 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 PNLIPRP1P54315 467 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 BCAT1P54687 386 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 CORO7P57737 925 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 DLG4P78352 724 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 SCAPQ12770 1279 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 FSTL1Q12841 308 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 LRMPQ12912 555 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 CHAF1BQ13112 559 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 SMC1AQ14683 1233 aaKnown RBP6.05□□□□□ -1.44
USP47-204ENST00000525078 ANKRD1Q15327 319 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 ASIC2Q16515 512 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 MAN2A1Q16706 1144 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 CTXN3Q4LDR2 81 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 LRCH2Q5VUJ6 765 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 MILR1Q7Z6M3 343 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 DCP2Q8IU60 420 aaKnown RBP6.05□□□□□ -1.44
USP47-204ENST00000525078 LMNTD2Q8IXW0 634 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 CEP57L1Q8IYX8 460 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 BEND7Q8N7W2 519 aaPredicted RBP6.05□□□□□ -1.44
USP47-204ENST00000525078 OR1N1Q8NGS0 311 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 TTLL11Q8NHH1 800 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 MGARPQ8TDB4 240 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 KCNG4Q8TDN1 519 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 SEC14L1Q92503 715 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 CUL5Q93034 780 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 UTP4Q969X6 686 aaKnown RBP6.05□□□□□ -1.44
USP47-204ENST00000525078 SDCCAG3Q96C92 435 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 CYFIP2Q96F07 1278 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 NEIL1Q96FI4 390 aaPredicted RBP6.05□□□□□ -1.44
USP47-204ENST00000525078 CALML4Q96GE6 196 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 HSPA12BQ96MM6 686 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 FDXACB1Q9BRP7 624 aaPredicted RBP6.05□□□□□ -1.44
USP47-204ENST00000525078 DDX23Q9BUQ8 820 aaKnown RBP6.05□□□□□ -1.44
USP47-204ENST00000525078 DPH1Q9BZG8 443 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 PCDHAC1Q9H158 963 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 CHODLQ9H9P2 273 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 A1CFQ9NQ94 594 aaKnown RBP6.05□□□□□ -1.44
USP47-204ENST00000525078 PRDM8Q9NQV8 689 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 ABCF3Q9NUQ8 709 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 KCMF1Q9P0J7 381 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 ZNF112Q9UJU3 913 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 MED16Q9Y2X0 877 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 SNX8Q9Y5X2 465 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 CYP46A1Q9Y6A2 500 aa6.05□□□□□ -1.44
USP47-204ENST00000525078 A0A1W2PQ45 241 aaPredicted RBP6.04□□□□□ -1.44
USP47-204ENST00000525078 A0A1W2PQY0 241 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 TCRBV5S2A0A599 114 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 FAM229AH3BQW9 127 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 F2RL2O00254 374 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 OIP5O43482 229 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 COBLO75128 1261 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 ABHD16AO95870 558 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 IL1R1P14778 569 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 ATP6V1B1P15313 513 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 ELNP15502 786 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 FAHP16930 419 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 IL1R2P27930 398 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 PIK3CGP48736 1102 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 MMP14P50281 582 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 ALDH18A1P54886 795 aaKnown RBP6.04□□□□□ -1.44
USP47-204ENST00000525078 IFI35P80217 286 aaPredicted RBP6.04□□□□□ -1.44
USP47-204ENST00000525078 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.04□□□□□ -1.44
USP47-204ENST00000525078 GALNT2Q10471 571 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 MAMLD1Q13495 774 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 GPR68Q15743 365 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 MAPKAPK3Q16644 382 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 ATP2B3Q16720 1220 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 SNX30Q5VWJ9 437 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 ZNF449Q6P9G9 518 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 OGFOD3Q6PK18 319 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 BBS12Q6ZW61 710 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 DNAJB7Q7Z6W7 309 aaPredicted RBP6.04□□□□□ -1.44
USP47-204ENST00000525078 FAM90A1Q86YD7 464 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 PQLC1Q8N2U9 271 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 HOXB13Q92826 284 aaPredicted RBP6.04□□□□□ -1.44
USP47-204ENST00000525078 SH3KBP1Q96B97 665 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 C3orf49Q96BT1 292 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 FAM46AQ96IP4 442 aaKnown RBP6.04□□□□□ -1.44
USP47-204ENST00000525078 BRD8Q9H0E9 1235 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 LDAHQ9H6V9 325 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 RRAGCQ9HB90 399 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 CCDC177Q9NQR7 707 aaPredicted RBP6.04□□□□□ -1.44
USP47-204ENST00000525078 TMOD4Q9NZQ9 345 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 PI4KBQ9UBF8 816 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 USP21Q9UK80 565 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 ZNF215Q9UL58 517 aaPredicted RBP6.04□□□□□ -1.44
USP47-204ENST00000525078 PALD1Q9ULE6 856 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 ZMYND8Q9ULU4 1186 aaPredicted RBP6.04□□□□□ -1.44
USP47-204ENST00000525078 WASF3Q9UPY6 502 aa6.04□□□□□ -1.44
USP47-204ENST00000525078 IRS2Q9Y4H2 1338 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 CCDC78A2IDD5 438 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 MBD3L4A6NDZ8 208 aaPredicted RBP6.03□□□□□ -1.44
USP47-204ENST00000525078 MBD3L3A6NE82 208 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms