RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 ANKRD7Q92527 254 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 ZNF592Q92610 1267 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 RUBCNQ92622 972 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 SECISBP2LQ93073 1101 aaKnown RBP7.61□□□□□ -1.19
VPS11-201ENST00000524454 ZNF689Q96CS4 500 aaPredicted RBP7.61□□□□□ -1.19
VPS11-201ENST00000524454 WDR24Q96S15 920 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 CBWD1Q9BRT8 395 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 FTHL17Q9BXU8 183 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 FAM117AQ9C073 453 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 INTS2Q9H0H0 1204 aaKnown RBP7.61□□□□□ -1.19
VPS11-201ENST00000524454 MINDY3Q9H8M7 445 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 RC3H2Q9HBD1 1191 aaKnown RBP7.61□□□□□ -1.19
VPS11-201ENST00000524454 LZTFL1Q9NQ48 299 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 GPRC5CQ9NQ84 441 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 RGS18Q9NS28 235 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 RNF14Q9UBS8 474 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 CDC23Q9UJX2 597 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 PCDHB7Q9Y5E2 793 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 PCDHA13Q9Y5I0 950 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 SQORQ9Y6N5 450 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 REV3LO60673 3130 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 A0A0B4J269 797 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 ZNF233A6NK53 670 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 TBKBP1A7MCY6 615 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 C9IYK1 514 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 K7ERI5 159 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 ZNF263O14978 683 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 TOM1L1O75674 476 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 LINC00271P0C7V0 271 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 SLC9A1P19634 815 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 SOX5P35711 763 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 LIG4P49917 911 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 HADHBP55084 474 aaKnown RBP7.6□□□□□ -1.19
VPS11-201ENST00000524454 AMPD2Q01433 879 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 GUCA2AQ02747 115 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 GPM6BQ13491 265 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 SKIV2LQ15477 1246 aaKnown RBP7.6□□□□□ -1.19
VPS11-201ENST00000524454 CBWD6Q4V339 395 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 TDRD12Q587J7 1177 aaKnown RBP7.6□□□□□ -1.19
VPS11-201ENST00000524454 CBWD3Q5JTY5 395 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 CBWD5Q5RIA9 395 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 C1orf220Q5T0J3 134 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 SLC39A4Q6P5W5 647 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 C15orf39Q6ZRI6 1047 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 SLC24A5Q71RS6 500 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 TAS1R3Q7RTX0 852 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 CATSPER4Q7RTX7 472 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 ZNF572Q7Z3I7 529 aaPredicted RBP7.6□□□□□ -1.19
VPS11-201ENST00000524454 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.6□□□□□ -1.19
VPS11-201ENST00000524454 TMEM192Q8IY95 271 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 PDCL2Q8N4E4 241 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 FBXL13Q8NEE6 735 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 BSNDQ8WZ55 320 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 POMGNT1Q8WZA1 660 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 TAF4BQ92750 862 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 LPPQ93052 612 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 NOX5Q96PH1 765 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 SYT11Q9BT88 431 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 MRPL4Q9BYD3 311 aaKnown RBP7.6□□□□□ -1.19
VPS11-201ENST00000524454 GCOM2Q9BZD3 368 aaPredicted RBP7.6□□□□□ -1.19
VPS11-201ENST00000524454 CCDC113Q9H0I3 377 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 IFT122Q9HBG6 1241 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 RNF19AQ9NV58 838 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 PIN4Q9Y237 131 aaKnown RBP7.6□□□□□ -1.19
VPS11-201ENST00000524454 SLC27A5Q9Y2P5 690 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 PCDHGC5Q9Y5F6 944 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 FHOD1Q9Y613 1164 aa7.6□□□□□ -1.19
VPS11-201ENST00000524454 PRRC2BQ5JSZ5 2229 aaKnown RBP7.59□□□□□ -1.19
VPS11-201ENST00000524454 TCF20Q9UGU0 1960 aaKnown RBP7.59□□□□□ -1.19
VPS11-201ENST00000524454 MEIS3P2A8K0S8 358 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 FANCGO15287 622 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 GRM6O15303 877 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 TADA3O75528 432 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 URI1O94763 535 aaPredicted RBP7.59□□□□□ -1.19
VPS11-201ENST00000524454 STAG3L1P0CL83 205 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 ZSCAN20P17040 1043 aaPredicted RBP7.59□□□□□ -1.19
VPS11-201ENST00000524454 ATF7P17544 494 aaPredicted RBP7.59□□□□□ -1.19
VPS11-201ENST00000524454 TCP1P17987 556 aaKnown RBP7.59□□□□□ -1.19
VPS11-201ENST00000524454 PBX3P40426 434 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 MAGEA1P43355 309 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 MFAP3P55082 362 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 USP46P62068 366 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 TFF2Q03403 129 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 KCNC4Q03721 635 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 PTK2Q05397 1052 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 CKAP4Q07065 602 aaKnown RBP7.59□□□□□ -1.19
VPS11-201ENST00000524454 MCL1Q07820 350 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 CAPSQ13938 189 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 CLUL1Q15846 466 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 MAPK6Q16659 721 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 ZNF569Q5MCW4 686 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 SPOUT1Q5T280 376 aaKnown RBP7.59□□□□□ -1.19
VPS11-201ENST00000524454 TRAPPC11Q7Z392 1133 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 SRGAP1Q7Z6B7 1085 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 ZNF410Q86VK4 478 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 CDR2LQ86X02 465 aaPredicted RBP7.59□□□□□ -1.19
VPS11-201ENST00000524454 ZNF677Q86XU0 584 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 ECHDC2Q86YB7 292 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 GPR161Q8N6U8 529 aaKnown RBP7.59□□□□□ -1.19
VPS11-201ENST00000524454 RNF149Q8NC42 400 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms