RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 DNMT3BQ9UBC3 853 aaKnown RBP18.63■□□□□ 0.57
CCNC-213ENST00000523541 ITGA11Q9UKX5 1188 aa18.63■□□□□ 0.57
CCNC-213ENST00000523541 DUSP12Q9UNI6 340 aa18.63■□□□□ 0.57
CCNC-213ENST00000523541 KPNA7A9QM74 516 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 SPTLC1O15269 473 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 ACTN4O43707 911 aaKnown RBP18.62■□□□□ 0.57
CCNC-213ENST00000523541 CFHP08603 1231 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 HOXD13P35453 343 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 AFMP43652 599 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 PTPN5P54829 565 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 NUCB2P80303 420 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 ADCY1Q08828 1119 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 CUL4BQ13620 913 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 IER5LQ5T953 404 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 IQCEQ6IPM2 695 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 MTSS1LQ765P7 747 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 C12orf56Q8IXR9 622 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 EFCAB13Q8IY85 973 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 SLC44A3Q8N4M1 653 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 ST13P5Q8NFI4 369 aaPredicted RBP18.62■□□□□ 0.57
CCNC-213ENST00000523541 SPATA18Q8TC71 538 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 SCFD1Q8WVM8 642 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 BORCS6Q96GS4 357 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 ZNF512Q96ME7 567 aaPredicted RBP18.62■□□□□ 0.57
CCNC-213ENST00000523541 PCIF1Q9H4Z3 704 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 HSPBP1Q9NZL4 362 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 SERTAD1Q9UHV2 236 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 TIMM13Q9Y5L4 95 aaPredicted RBP18.62■□□□□ 0.57
CCNC-213ENST00000523541 INSL5Q9Y5Q6 135 aa18.62■□□□□ 0.57
CCNC-213ENST00000523541 A0A1B0GVL5 298 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 CYB561D2O14569 222 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 PPEF2O14830 753 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 NARSO43776 548 aaKnown RBP18.61■□□□□ 0.57
CCNC-213ENST00000523541 PRPF40AO75400 957 aaKnown RBP18.61■□□□□ 0.57
CCNC-213ENST00000523541 SEC24AO95486 1093 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 PFKFB1P16118 471 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 RBP5P82980 135 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 TFAMQ00059 246 aaKnown RBP18.61■□□□□ 0.57
CCNC-213ENST00000523541 SIX5Q8N196 739 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 TMEM130Q8N3G9 435 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 C2orf15Q8WU43 125 aaKnown RBP18.61■□□□□ 0.57
CCNC-213ENST00000523541 FGF13Q92913 245 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 HPS3Q969F9 1004 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 CCDC34Q96HJ3 373 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 BLZF1Q9H2G9 400 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 AGPAT3Q9NRZ7 376 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 HCFC1R1Q9NWW0 138 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 WNT16Q9UBV4 365 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 MRPS23Q9Y3D9 190 aaKnown RBP18.61■□□□□ 0.57
CCNC-213ENST00000523541 R3HCC1Q9Y3T6 440 aaKnown RBP18.61■□□□□ 0.57
CCNC-213ENST00000523541 ASB3Q9Y575 518 aa18.61■□□□□ 0.57
CCNC-213ENST00000523541 TGFB1I1O43294 461 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 RHOP08100 348 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 SYKP43405 635 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 NHLH1Q02575 133 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 KNOP1Q1ED39 458 aaKnown RBP18.6■□□□□ 0.57
CCNC-213ENST00000523541 DUOXA2Q1HG44 320 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 CYP4A22Q5TCH4 519 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 RNF19BQ6ZMZ0 732 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 DPH6Q7L8W6 267 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 TMEM86AQ8N2M4 240 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 CSGALNACT2Q8N6G5 542 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 GLIS3Q8NEA6 775 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 PRSS33Q8NF86 280 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 ING5Q8WYH8 240 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 ANKRD36BP1Q96IX9 119 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 INTS13Q9NVM9 706 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 GDAP2Q9NXN4 497 aa18.6■□□□□ 0.57
CCNC-213ENST00000523541 GOLGA8IPA6NC78 632 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 GOLGA8JA6NMD2 632 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 KIF20AO95235 890 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 TMEM191BP0C7N4 346 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 SRFP11831 508 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 ALDH1A3P47895 512 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 TUFMP49411 452 aaKnown RBP18.59■□□□□ 0.57
CCNC-213ENST00000523541 HTR4Q13639 388 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 ASTLQ6HA08 431 aaPredicted RBP18.59■□□□□ 0.57
CCNC-213ENST00000523541 CENPPQ6IPU0 288 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 WDR49Q8IV35 697 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 C1orf127Q8N9H9 656 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 XXYLT1Q8NBI6 393 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 ZSWIM2Q8NEG5 633 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 ITFG1Q8TB96 612 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 CCDC47Q96A33 483 aaKnown RBP18.59■□□□□ 0.57
CCNC-213ENST00000523541 CORO1BQ9BR76 489 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 GPR88Q9GZN0 384 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 PDE11AQ9HCR9 933 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 SLC39A2Q9NP94 309 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 EXOC1Q9NV70 894 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 CA14Q9ULX7 337 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 AGAP1Q9UPQ3 857 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 NUMBLQ9Y6R0 609 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 MUC6Q6W4X9 2439 aa18.59■□□□□ 0.57
CCNC-213ENST00000523541 KLRC4O43908 158 aa18.58■□□□□ 0.56
CCNC-213ENST00000523541 HUS1O60921 280 aa18.58■□□□□ 0.56
CCNC-213ENST00000523541 TNNC2P02585 160 aa18.58■□□□□ 0.56
CCNC-213ENST00000523541 ITGB3P05106 788 aa18.58■□□□□ 0.56
CCNC-213ENST00000523541 FAM163BP0C2L3 166 aa18.58■□□□□ 0.56
CCNC-213ENST00000523541 CLCN5P51795 746 aa18.58■□□□□ 0.56
CCNC-213ENST00000523541 EPHB3P54753 998 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms