RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 KLK7P49862 253 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 CETN1Q12798 172 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 SYCP1Q15431 976 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 CLUL1Q15846 466 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 UPP1Q16831 310 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 EXOC3L4Q17RC7 722 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 PDE12Q6L8Q7 609 aaKnown RBP12.82□□□□□ -0.36
PVT1-215ENST00000522963 KIAA1841Q6NSI8 718 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 LLGL2Q6P1M3 1020 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 TAS1R1Q7RTX1 841 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 EHBP1Q8NDI1 1231 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 DDX27Q96GQ7 796 aaKnown RBP12.82□□□□□ -0.36
PVT1-215ENST00000522963 B3GALT6Q96L58 329 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 UROC1Q96N76 676 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 ERGIC2Q96RQ1 377 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 PI4K2AQ9BTU6 479 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 VN1R3Q9BXE9 311 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 TRIM5Q9C035 493 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 INTS2Q9H0H0 1204 aaKnown RBP12.82□□□□□ -0.36
PVT1-215ENST00000522963 ZBP1Q9H171 429 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 XYLT2Q9H1B5 865 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 UBE2ZQ9H832 354 aaPredicted RBP12.82□□□□□ -0.36
PVT1-215ENST00000522963 NGRNQ9NPE2 291 aaKnown RBP12.82□□□□□ -0.36
PVT1-215ENST00000522963 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.82□□□□□ -0.362e-7■■■■■ 61.4
PVT1-215ENST00000522963 GCNT4Q9P109 453 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 ADAM28Q9UKQ2 775 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 COG5Q9UP83 839 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 SIK3Q9Y2K2 1263 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 PDCD11Q14690 1871 aaKnown RBP12.81□□□□□ -0.36
PVT1-215ENST00000522963 CDH23Q9H251 3354 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 C2orf71A6NGG8 1288 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 H3BQ06 376 aaPredicted RBP12.81□□□□□ -0.36
PVT1-215ENST00000522963 SPTLC1O15269 473 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 KIF4AO95239 1232 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 URODP06132 367 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 CTSAP10619 480 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 PON1P27169 355 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 PBX1P40424 430 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 NDUFV1P49821 464 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 ZNF75DP51815 510 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 RBM10P98175 930 aaKnown RBP12.81□□□□□ -0.36
PVT1-215ENST00000522963 APBA1Q02410 837 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 SGSM1Q2NKQ1 1148 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 SPOPLQ6IQ16 392 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 DPY19L2P1Q6NXN4 242 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 FUT10Q6P4F1 479 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 CD300LGQ6UXG3 332 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 CEP57Q86XR8 500 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 LRRC52Q8N7C0 313 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 C3orf58Q8NDZ4 430 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 LSM14BQ9BX40 385 aaKnown RBP12.81□□□□□ -0.36
PVT1-215ENST00000522963 GPR62Q9BZJ7 368 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 APOBEC3GQ9HC16 384 aaKnown RBP12.81□□□□□ -0.36
PVT1-215ENST00000522963 SIX2Q9NPC8 291 aa12.81□□□□□ -0.36
PVT1-215ENST00000522963 ANK1P16157 1881 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 A0A1W2PQC6 194 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 B3GAT3O94766 335 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 STAU1O95793 577 aaKnown RBP12.8□□□□□ -0.36
PVT1-215ENST00000522963 ASS1P00966 412 aaKnown RBP12.8□□□□□ -0.36
PVT1-215ENST00000522963 SOD2P04179 222 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 ATICP31939 592 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 MRE11P49959 708 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 NOP14P78316 857 aaKnown RBP12.8□□□□□ -0.36
PVT1-215ENST00000522963 MRPS5P82675 430 aaKnown RBP12.8□□□□□ -0.36
PVT1-215ENST00000522963 LRMPQ12912 555 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 ZNF699Q32M78 642 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 WDR44Q5JSH3 913 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 TRIM65Q6PJ69 517 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 DCLRE1AQ6PJP8 1040 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 GLYCTKQ8IVS8 523 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 MRPL43Q8N983 215 aaKnown RBP12.8□□□□□ -0.36
PVT1-215ENST00000522963 TAF4BQ92750 862 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 TATDN2Q93075 761 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 PABPC5Q96DU9 382 aaKnown RBP12.8□□□□□ -0.36
PVT1-215ENST00000522963 HPDLQ96IR7 371 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 ZNF560Q96MR9 790 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 HERC2P3Q9BVR0 1158 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 VRTNQ9H8Y1 702 aa12.8□□□□□ -0.36
PVT1-215ENST00000522963 MRPL17Q9NRX2 175 aaKnown RBP12.8□□□□□ -0.36
PVT1-215ENST00000522963 R3HCC1Q9Y3T6 440 aaKnown RBP12.8□□□□□ -0.36
PVT1-215ENST00000522963 TRANK1O15050 2925 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 TMEM189-UBE2V1I3L0A0 370 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 I3L4J1 428 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 NCK2O43639 380 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 ADCY5O95622 1261 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 TPM3P06753 285 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 KLRC2P26717 231 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 PNPLA4P41247 253 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 BRCC3P46736 316 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 GLUD2P49448 558 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 AARSP49588 968 aaKnown RBP eCLIP12.79□□□□□ -0.36
PVT1-215ENST00000522963 TAF6P49848 677 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 KCNQ1P51787 676 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 LILRA4P59901 499 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 DLX2Q07687 328 aaPredicted RBP12.79□□□□□ -0.36
PVT1-215ENST00000522963 MYO1EQ12965 1108 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 ADAM15Q13444 863 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 PTPN14Q15678 1187 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 DUSP6Q16828 381 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 AAK1Q2M2I8 961 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms