RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 ATAD1Q8NBU5 361 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 TTC8Q8TAM2 541 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 KIF12Q96FN5 646 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 ZFYVE19Q96K21 471 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 IER2Q9BTL4 223 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 RAB34Q9BZG1 259 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 CITO14578 2027 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 FRYQ5TBA9 3013 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 LACTBL1A8MY62 500 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 K7ESF4 209 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 FAM189A1O60320 539 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 CLTAP09496 248 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 MLLT6P55198 1093 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 GPR17Q13304 367 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 ENOX2Q16206 610 aaKnown RBP16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 ARSHQ5FYA8 562 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 HYIQ5T013 277 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 CENPPQ6IPU0 288 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 PRR23BQ6ZRT6 265 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 ARID3BQ8IVW6 561 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 SYT2Q8N9I0 419 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 KIF2CQ99661 725 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 RTKNQ9BST9 563 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 TIPINQ9BVW5 301 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 PLEKHA5Q9HAU0 1116 aa16.62■□□□□ 0.25
TRAPPC9-213ENST00000522504 PDCD11Q14690 1871 aaKnown RBP16.61■□□□□ 0.25
TRAPPC9-213ENST00000522504 MTMR11A4FU01 709 aa16.61■□□□□ 0.25
TRAPPC9-213ENST00000522504 CHADO15335 359 aa16.61■□□□□ 0.25
TRAPPC9-213ENST00000522504 RETP07949 1114 aa16.61■□□□□ 0.25
TRAPPC9-213ENST00000522504 KPNA1P52294 538 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC9-213ENST00000522504 DNAJB7Q7Z6W7 309 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC9-213ENST00000522504 SPEM1Q8N4L4 309 aa16.61■□□□□ 0.25
TRAPPC9-213ENST00000522504 CSGALNACT1Q8TDX6 532 aa16.61■□□□□ 0.25
TRAPPC9-213ENST00000522504 LRRC15Q8TF66 581 aa16.61■□□□□ 0.25
TRAPPC9-213ENST00000522504 GPR88Q9GZN0 384 aa16.61■□□□□ 0.25
TRAPPC9-213ENST00000522504 GTSE1Q9NYZ3 720 aa16.61■□□□□ 0.25
TRAPPC9-213ENST00000522504 RAB23Q9ULC3 237 aa16.61■□□□□ 0.25
TRAPPC9-213ENST00000522504 MAP1BP46821 2468 aaKnown RBP16.61■□□□□ 0.25
TRAPPC9-213ENST00000522504 MYBPHLA2RUH7 354 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 OR6C75A6NL08 312 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 SPECC1L-ADORA2AF8WAN1 911 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 LAD1O00515 517 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 GDF9O60383 454 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 PRAMEF12O95522 483 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 PLA2G4BP0C869 781 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 CYP3A5P20815 502 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 MATR3P43243 847 aaKnown RBP eCLIP16.6■□□□□ 0.254e-7■■■■□ 25.8
TRAPPC9-213ENST00000522504 SMTNP53814 917 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 EPHB3P54753 998 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 NCKAP1LP55160 1127 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 TNK2Q07912 1038 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 SIM2Q14190 667 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 PPP2R5DQ14738 602 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 HEATR6Q6AI08 1181 aaKnown RBP16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 DSTYKQ6XUX3 929 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 USP37Q86T82 979 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 YAF2Q8IY57 180 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 OR10T2Q8NGX3 314 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 E2F7Q96AV8 911 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 SEMA4GQ9NTN9 838 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 UBQLN1Q9UMX0 589 aaKnown RBP16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 USP24Q9UPU5 2620 aa16.6■□□□□ 0.25
TRAPPC9-213ENST00000522504 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 PAPSS2O95340 614 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 ADRB2P07550 413 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 CTHP32929 405 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 ALDH1A3P47895 512 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 LILRA4P59901 499 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 ATP2C1P98194 919 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 PPP2R3AQ06190 1150 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 PLD1Q13393 1074 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 MYBPC2Q14324 1141 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 TMEM119Q4V9L6 283 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 OVOS1Q6IE37 1185 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 SLC39A4Q6P5W5 647 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 HAUS6Q7Z4H7 955 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 PSMG2Q969U7 264 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 BICD1Q96G01 975 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 ZSCAN31Q96LW9 406 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 LPIN3Q9BQK8 851 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 OXCT2Q9BYC2 517 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 SMG9Q9H0W8 520 aaKnown RBP16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 ATXN3LQ9H3M9 355 aa16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 C8orf33Q9H7E9 229 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC9-213ENST00000522504 CHD6Q8TD26 2715 aa16.58■□□□□ 0.25
TRAPPC9-213ENST00000522504 VWA3AA6NCI4 1184 aa16.58■□□□□ 0.24
TRAPPC9-213ENST00000522504 SLC30A4O14863 429 aa16.58■□□□□ 0.24
TRAPPC9-213ENST00000522504 TYMPP19971 482 aa16.58■□□□□ 0.24
TRAPPC9-213ENST00000522504 GABRR2P28476 465 aa16.58■□□□□ 0.24
TRAPPC9-213ENST00000522504 CCINQ13939 588 aa16.58■□□□□ 0.24
TRAPPC9-213ENST00000522504 LRRC32Q14392 662 aa16.58■□□□□ 0.24
TRAPPC9-213ENST00000522504 PON2Q15165 354 aa16.58■□□□□ 0.24
TRAPPC9-213ENST00000522504 GPR158Q5T848 1215 aa16.58■□□□□ 0.24
TRAPPC9-213ENST00000522504 SPATA1Q5VX52 437 aa16.58■□□□□ 0.24
TRAPPC9-213ENST00000522504 JADE1Q6IE81 842 aa16.58■□□□□ 0.24
TRAPPC9-213ENST00000522504 PKN3Q6P5Z2 889 aa16.58■□□□□ 0.24
TRAPPC9-213ENST00000522504 LONP2Q86WA8 852 aa16.58■□□□□ 0.24
TRAPPC9-213ENST00000522504 NETO1Q8TDF5 533 aa16.58■□□□□ 0.24
TRAPPC9-213ENST00000522504 KCNN1Q92952 543 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms