RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CACNB2Q08289 660 aaPredicted RBP16.99■□□□□ 0.31
USP42-207ENST00000521713 FBXW10Q5XX13 1052 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 MPZL3Q6UWV2 235 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 TTC30AQ86WT1 665 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 CEP19Q96LK0 163 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 TRIM33Q9UPN9 1127 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 PRG3Q9Y2Y8 225 aaPredicted RBP16.99■□□□□ 0.31
USP42-207ENST00000521713 PRAMEP78395 509 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 PPIL2Q13356 520 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 SPATA21Q7Z572 469 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 ATP8B4Q8TF62 1192 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 WDR24Q96S15 920 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 GALCP54803 685 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 ST8SIA6P61647 398 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 PGM5Q15124 567 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 FAM47EQ6ZV65 393 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 ASAP3Q8TDY4 903 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 MMTAG2Q9BU76 263 aaKnown RBP16.98■□□□□ 0.31
USP42-207ENST00000521713 IL17RBQ9NRM6 502 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 KRT14P02533 472 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 NEK2P51955 445 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 GPS1Q13098 491 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 RARS2Q5T160 578 aaKnown RBP16.98■□□□□ 0.31
USP42-207ENST00000521713 NOP9Q86U38 636 aaKnown RBP16.98■□□□□ 0.31
USP42-207ENST00000521713 FHOD1Q9Y613 1164 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 FAM200BP0CF97 657 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 AKR1A1P14550 325 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 NR1I3Q14994 352 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 A0A1W2PQJ5 194 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 CYP2C8P10632 490 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 SLC9A1P19634 815 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 NTRK3Q16288 839 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 NFRKBQ6P4R8 1299 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 TRIM67Q6ZTA4 783 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 GSPT2Q8IYD1 628 aaKnown RBP16.98■□□□□ 0.31
USP42-207ENST00000521713 KIAA1257Q9ULG3 409 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 TTC7AQ9ULT0 858 aaPredicted RBP16.98■□□□□ 0.31
USP42-207ENST00000521713 SNX12Q9UMY4 172 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 PCDHB8Q9UN66 801 aa16.98■□□□□ 0.31
USP42-207ENST00000521713 NPTX2P47972 431 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 GUCY1A3Q02108 690 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 CCDC137Q6PK04 289 aaKnown RBP16.97■□□□□ 0.31
USP42-207ENST00000521713 CCNI2Q6ZMN8 369 aaPredicted RBP16.97■□□□□ 0.31
USP42-207ENST00000521713 FRA10AC1Q70Z53 315 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 MTG1Q9BT17 334 aaPredicted RBP16.97■□□□□ 0.31
USP42-207ENST00000521713 FAM49BQ9NUQ9 324 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 DPP3Q9NY33 737 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 DBR1Q9UK59 544 aaKnown RBP16.97■□□□□ 0.31
USP42-207ENST00000521713 WDR91A4D1P6 747 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 PTPRAP18433 802 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 ANO4Q32M45 955 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 KSR1Q8IVT5 923 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 CPA5Q8WXQ8 436 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 H7C4K7 107 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 ARHGEF9O43307 516 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 RASGRP2Q7LDG7 609 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.97■□□□□ 0.31
USP42-207ENST00000521713 DFFAO00273 331 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 PSMD3O43242 534 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 ITGB3P05106 788 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 HNRNPH1P31943 449 aaKnown RBP16.97■□□□□ 0.31
USP42-207ENST00000521713 GTF2H1P32780 548 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 NAB2Q15742 525 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 SLC30A5Q8TAD4 765 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 TTC8Q8TAM2 541 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 RNPC3Q96LT9 517 aaKnown RBP16.97■□□□□ 0.31
USP42-207ENST00000521713 SNX5Q9Y5X3 404 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 CAMTA1Q9Y6Y1 1673 aa16.97■□□□□ 0.31
USP42-207ENST00000521713 B3GAT3O94766 335 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 WEE2P0C1S8 567 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 SSTR3P32745 418 aaPredicted RBP16.96■□□□□ 0.31
USP42-207ENST00000521713 IRAK1P51617 712 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 EIF3EP60228 445 aaKnown RBP16.96■□□□□ 0.31
USP42-207ENST00000521713 GRIN1Q05586 938 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 ATL2Q8NHH9 583 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 DDX47Q9H0S4 455 aaKnown RBP16.96■□□□□ 0.31
USP42-207ENST00000521713 KCNQ5Q9NR82 932 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 CFLARO15519 480 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 KLHDC7AQ5VTJ3 777 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 NYAP1Q6ZVC0 841 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 ENGASEQ8NFI3 743 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 SYN2Q92777 582 aaPredicted RBP16.96■□□□□ 0.31
USP42-207ENST00000521713 RMDN1Q96DB5 314 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 FAM161BQ96MY7 647 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 EPC1Q9H2F5 836 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 SH3BP1Q9Y3L3 701 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 KPNA7A9QM74 516 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 SNX2O60749 519 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 DIAPH2O60879 1101 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 KCNA4P22459 653 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 KIZQ2M2Z5 673 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 TMTC4Q5T4D3 741 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 RGS9BPQ6ZS82 235 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 ERGIC2Q96RQ1 377 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 L2HGDHQ9H9P8 463 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 KBTBD4Q9NVX7 518 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 FBXL5Q9UKA1 691 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 TRAF3IP3Q9Y228 551 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 CFAP69A5D8W1 941 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 GSTA4O15217 222 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms