RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 UPP1Q16831 310 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 C11orf91Q3C1V1 193 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 C4orf17Q53FE4 359 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 GLRA4Q5JXX5 417 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 HYIQ5T013 277 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 C6orf118Q5T5N4 469 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 PDXDC1Q6P996 788 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 RSPO2Q6UXX9 243 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 APBB1IPQ7Z5R6 666 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 CEP120Q8N960 986 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 FLCNQ8NFG4 579 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 ATOH1Q92858 354 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 TMX3Q96JJ7 454 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 PNMA5Q96PV4 448 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 NTPCRQ9BSD7 190 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 TARS2Q9BW92 718 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 MRPL4Q9BYD3 311 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 CDT1Q9H211 546 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 MFSD1Q9H3U5 465 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 C17orf75Q9HAS0 396 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 MTRRQ9UBK8 725 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 WNT16Q9UBV4 365 aa10.16□□□□□ -0.78
CTNNA1-221ENST00000520339 PHLPP2Q6ZVD8 1323 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 PROB1E7EW31 1015 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 C8AP07357 584 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 POU2F2P09086 479 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 MCF2P10911 925 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 KCNE1P15382 129 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 AOC1P19801 751 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 HOXA9P31269 272 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 OR1D2P34982 312 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 TXLNAP40222 546 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 CLCNKBP51801 687 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 ATP2C1P98194 919 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 SOX4Q06945 474 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 RILPL1Q5EBL4 403 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 MCTP1Q6DN14 999 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 GRASPQ7Z6J2 395 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 SYT2Q8N9I0 419 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 DRC1Q96MC2 740 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 UROC1Q96N76 676 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 ZMAT2Q96NC0 199 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 TIPINQ9BVW5 301 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 CCDC94Q9BW85 323 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 KMT5AQ9NQR1 393 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 FBXL21Q9UKT6 434 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 KIF3AQ9Y496 699 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 BACE2Q9Y5Z0 518 aa10.15□□□□□ -0.78
CTNNA1-221ENST00000520339 TRIOO75962 3097 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 KRBA1A5PL33 1030 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 SLC16A4O15374 487 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 MEFVO15553 781 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 SRFP11831 508 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 TKTP29401 623 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 BRCC3P46736 316 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 YARSP54577 528 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 NTHL1P78549 312 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 HTR4Q13639 388 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 UVSSAQ2YD98 709 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 ZNF568Q3ZCX4 644 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 PPM1LQ5SGD2 360 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 AXDND1Q5T1B0 1012 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 LIN9Q5TKA1 542 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 MPZL3Q6UWV2 235 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 RTL10Q7L3V2 364 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 GET4Q7L5D6 327 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 PRICKLE2Q7Z3G6 844 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 ATCAYQ86WG3 371 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 C3orf58Q8NDZ4 430 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 TMEM161BQ8NDZ6 487 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 GIPC2Q8TF65 315 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 IFT43Q96FT9 208 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 ZBTB45Q96K62 511 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 SNX27Q96L92 541 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 ACAP3Q96P50 834 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 RTP3Q9BQQ7 232 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 RPP25Q9BUL9 199 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 GOLGA2P5Q9HBQ8 144 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 TOPORSQ9NS56 1045 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 KCNG1Q9UIX4 513 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 CDH7Q9ULB5 785 aa10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 ZFP37Q9Y6Q3 630 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-221ENST00000520339 FAM187AA6NFU0 413 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 I3L4J1 428 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 CCL16O15467 120 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 TRAPPC3O43617 180 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 TBC1D4O60343 1298 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 FZD6O60353 706 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 GFRA3O60609 400 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 XYLBO75191 536 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 PLA2G4BP0C869 781 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 MAPTP10636 758 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 PLS3P13797 630 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 GJB2P29033 226 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 RPL9P32969 192 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 SLC12A3P55017 1021 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 OSTNP61366 133 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 POU4F2Q12837 409 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 MRPL58Q14197 206 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 ZRSR1Q15695 479 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms