RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 RAP1GAPP47736 663 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 GUCY2FP51841 1108 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 CDH8P55286 799 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 SNX17Q15036 470 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 MFSD14CQ5VZR4 134 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 CYP4F22Q6NT55 531 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 MMS22LQ6ZRQ5 1243 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 PAXIP1Q6ZW49 1069 aaPredicted RBP19.66■□□□□ 0.74
FAM49B-214ENST00000519540 KIF12Q96FN5 646 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 HPDLQ96IR7 371 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 GPBP1L1Q9HC44 474 aaPredicted RBP19.66■□□□□ 0.74
FAM49B-214ENST00000519540 SNTG2Q9NY99 539 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 PCDHGC3Q9UN70 934 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 PCDHA3Q9Y5H8 950 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 CCDC66A2RUB6 948 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 ALDH1A1P00352 501 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 MMP8P22894 467 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 AXLP30530 894 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 FLT3LGP49771 235 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 GJA9P57773 515 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 RBP5P82980 135 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 PLEKHA7Q6IQ23 1121 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 NME8Q8N427 588 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 TRIM7Q9C029 511 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 KIF3CO14782 793 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 RAD51CO43502 376 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 TNFRSF8P28908 595 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 MAMLD1Q13495 774 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 CASP8Q14790 479 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 CLUL1Q15846 466 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 GNASQ5JWF2 1037 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 GSPT2Q8IYD1 628 aaKnown RBP19.65■□□□□ 0.74
FAM49B-214ENST00000519540 TMEM35BQ8NCS4 154 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 NAP1L3Q99457 506 aaPredicted RBP19.65■□□□□ 0.74
FAM49B-214ENST00000519540 ZNF518BQ9C0D4 1074 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 CXCL16Q9H2A7 254 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 SMYD3Q9H7B4 428 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 CYP3A43Q9HB55 503 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 MRPL47Q9HD33 250 aaKnown RBP19.65■□□□□ 0.74
FAM49B-214ENST00000519540 GDF3Q9NR23 364 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 DERAQ9Y315 318 aa19.65■□□□□ 0.74
FAM49B-214ENST00000519540 MYO1FO00160 1098 aa19.64■□□□□ 0.74
FAM49B-214ENST00000519540 SART1O43290 800 aaKnown RBP19.64■□□□□ 0.74
FAM49B-214ENST00000519540 HEXIM1O94992 359 aaKnown RBP19.64■□□□□ 0.74
FAM49B-214ENST00000519540 STAU1O95793 577 aaKnown RBP19.64■□□□□ 0.74
FAM49B-214ENST00000519540 CDH5P33151 784 aaPredicted RBP19.64■□□□□ 0.74
FAM49B-214ENST00000519540 CRYBB1P53674 252 aaPredicted RBP19.64■□□□□ 0.74
FAM49B-214ENST00000519540 RAD23BP54727 409 aa19.64■□□□□ 0.74
FAM49B-214ENST00000519540 IFT20Q8IY31 132 aa19.64■□□□□ 0.74
FAM49B-214ENST00000519540 WDTC1Q8N5D0 677 aa19.64■□□□□ 0.74
FAM49B-214ENST00000519540 WHAMMQ8TF30 809 aa19.64■□□□□ 0.74
FAM49B-214ENST00000519540 PAEPP09466 180 aa19.64■□□□□ 0.73
FAM49B-214ENST00000519540 P4HA1P13674 534 aa19.64■□□□□ 0.73
FAM49B-214ENST00000519540 AADACL2Q6P093 401 aa19.64■□□□□ 0.73
FAM49B-214ENST00000519540 AENQ8WTP8 325 aaKnown RBP19.64■□□□□ 0.73
FAM49B-214ENST00000519540 SNX27Q96L92 541 aa19.64■□□□□ 0.73
FAM49B-214ENST00000519540 MTG1Q9BT17 334 aaPredicted RBP19.64■□□□□ 0.73
FAM49B-214ENST00000519540 DDX47Q9H0S4 455 aaKnown RBP19.64■□□□□ 0.73
FAM49B-214ENST00000519540 EPB41L5Q9HCM4 733 aa19.64■□□□□ 0.73
FAM49B-214ENST00000519540 NR2E1Q9Y466 385 aa19.64■□□□□ 0.73
FAM49B-214ENST00000519540 HES2Q9Y543 173 aa19.64■□□□□ 0.73
FAM49B-214ENST00000519540 TRIP11Q15643 1979 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 CILPO75339 1184 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 SLC1A1P43005 524 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 YARSP54577 528 aaKnown RBP19.63■□□□□ 0.73
FAM49B-214ENST00000519540 GUCY2DQ02846 1103 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 ZBTB6Q15916 424 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 C1orf131Q8NDD1 294 aaKnown RBP19.63■□□□□ 0.73
FAM49B-214ENST00000519540 ZMAT2Q96NC0 199 aaKnown RBP19.63■□□□□ 0.73
FAM49B-214ENST00000519540 UPF3AQ9H1J1 476 aaKnown RBP19.63■□□□□ 0.73
FAM49B-214ENST00000519540 PLEKHA4Q9H4M7 779 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 SCINQ9Y6U3 715 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 ZSCAN5CA6NGD5 496 aaPredicted RBP19.63■□□□□ 0.73
FAM49B-214ENST00000519540 PGK1P00558 417 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 PYGMP11217 842 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 CD19P15391 556 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 PRKCZQ05513 592 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 ALKAL1Q6UXT8 129 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 SLC4A11Q8NBS3 891 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 UBXN6Q9BZV1 441 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 TRIM6Q9C030 488 aaPredicted RBP19.63■□□□□ 0.73
FAM49B-214ENST00000519540 NXF3Q9H4D5 531 aaKnown RBP19.63■□□□□ 0.73
FAM49B-214ENST00000519540 SLITRK6Q9H5Y7 841 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 PARVAQ9NVD7 372 aa19.63■□□□□ 0.73
FAM49B-214ENST00000519540 PIN4Q9Y237 131 aaKnown RBP19.63■□□□□ 0.73
FAM49B-214ENST00000519540 MED7O43513 233 aa19.62■□□□□ 0.73
FAM49B-214ENST00000519540 PROSCO94903 275 aa19.62■□□□□ 0.73
FAM49B-214ENST00000519540 CALB1P05937 261 aa19.62■□□□□ 0.73
FAM49B-214ENST00000519540 RWDD2BP57060 319 aa19.62■□□□□ 0.73
FAM49B-214ENST00000519540 CXCL17Q6UXB2 119 aa19.62■□□□□ 0.73
FAM49B-214ENST00000519540 TWNKQ96RR1 684 aa19.62■□□□□ 0.73
FAM49B-214ENST00000519540 ELOVL4Q9GZR5 314 aa19.62■□□□□ 0.73
FAM49B-214ENST00000519540 LHX5Q9H2C1 402 aa19.62■□□□□ 0.73
FAM49B-214ENST00000519540 HMGXB4Q9UGU5 601 aa19.62■□□□□ 0.73
FAM49B-214ENST00000519540 RALGAPA2Q2PPJ7 1873 aa19.62■□□□□ 0.73
FAM49B-214ENST00000519540 SEPT4O43236 478 aa19.61■□□□□ 0.73
FAM49B-214ENST00000519540 TRIM32Q13049 653 aa19.61■□□□□ 0.73
FAM49B-214ENST00000519540 SEL1L2Q5TEA6 688 aa19.61■□□□□ 0.73
FAM49B-214ENST00000519540 TAF2Q6P1X5 1199 aa19.61■□□□□ 0.73
FAM49B-214ENST00000519540 DENND1BQ6P3S1 775 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms