RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 KLF16Q9BXK1 252 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 KCNH7Q9NS40 1196 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 CEP72Q9P209 647 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 KANSL3Q9P2N6 904 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 ABCA2Q9BZC7 2435 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 CRYBG3Q68DQ2 2970 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 MYH7P12883 1935 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 A0A087WZ62 844 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 PRAMEF12O95522 483 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 TNFRSF8P28908 595 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 SLC26A2P50443 739 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 WDR4P57081 412 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 BNC1Q01954 994 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 CREMQ03060 361 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 TLE1Q04724 770 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 NR5A1Q13285 461 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 RTP5Q14D33 572 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 IGFBP7Q16270 282 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 C4orf48Q5BLP8 95 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 ZMYM1Q5SVZ6 1142 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 SWSAP1Q6NVH7 229 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 ATG14Q6ZNE5 492 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 DBX2Q6ZNG2 339 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 C11orf74Q86VG3 221 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 CEP57Q86XR8 500 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 SLC41A1Q8IVJ1 513 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 ARID3BQ8IVW6 561 aaPredicted RBP7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 YAF2Q8IY57 180 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 CMTR1Q8N1G2 835 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 RIN3Q8TB24 985 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 SNRNP27Q8WVK2 155 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 TNPO1Q92973 898 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 NXPE2Q96DL1 559 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 TMEM176AQ96HP8 235 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 FDXACB1Q9BRP7 624 aaPredicted RBP7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 TTPALQ9BTX7 342 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 POLR3CQ9BUI4 534 aaPredicted RBP7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 COLEC11Q9BWP8 271 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 LRRC3Q9BY71 257 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 FAM117AQ9C073 453 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 LRRCC1Q9C099 1032 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 CSRNP2Q9H175 543 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 STARD5Q9NSY2 213 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 PLEKHB1Q9UF11 243 aaPredicted RBP7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 MAD2L2Q9UI95 211 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 HES2Q9Y543 173 aa7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 HEMK1Q9Y5R4 338 aaPredicted RBP7.63□□□□□ -1.19
CTNNA1-216ENST00000519489 PDCD11Q14690 1871 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 NFASCO94856 1347 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 NEDD4P46934 1319 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 KLRF2D3W0D1 207 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 DDX39AO00148 427 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 BACH1O14867 736 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 BRINP1O60477 761 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 KIF4AO95239 1232 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 PARP1P09874 1014 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 RAB27AP51159 221 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 EPHA5P54756 1037 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 GRSF1Q12849 480 aaKnown RBP eCLIP7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 LINC00303Q3SY05 128 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 CCDC157Q569K6 752 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 FAM171A1Q5VUB5 890 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 TRIM68Q6AZZ1 485 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 MRPL14Q6P1L8 145 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 DGKHQ86XP1 1220 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 KSR1Q8IVT5 923 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 SIRT2Q8IXJ6 389 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 SETD7Q8WTS6 366 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 PGBD4Q96DM1 585 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 KIF1BPQ96EK5 621 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 CDHR1Q96JP9 859 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 C1QTNF2Q9BXJ5 285 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 EIF2AQ9BY44 585 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 CXCL16Q9H2A7 254 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 STK17AQ9UEE5 414 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 FNDC3AQ9Y2H6 1198 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 AK5Q9Y6K8 562 aa7.62□□□□□ -1.19
CTNNA1-216ENST00000519489 CNTNAP2Q9UHC6 1331 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 DHX15O43143 795 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 MYL4P12829 197 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 HOXD12P35452 270 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 HAND2P61296 217 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 GRIK2Q13002 908 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 AGERQ15109 404 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 ITPRIPL2Q3MIP1 535 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 PREPLQ4J6C6 727 aaPredicted RBP7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 CD300LGQ6UXG3 332 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 USP49Q70CQ1 688 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 PDZD4Q76G19 769 aaPredicted RBP7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 TICAM1Q8IUC6 712 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 ENAHQ8N8S7 591 aaPredicted RBP7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 CEP76Q8TAP6 659 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 CEP89Q96ST8 783 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 MAP7D2Q96T17 732 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 FAM83CQ9BQN1 747 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 RIOX1Q9H6W3 641 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 MINDY3Q9H8M7 445 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 LY9Q9HBG7 655 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 AGO4Q9HCK5 861 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms