RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-210ENST00000519362 SMPD1P17405 629 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 BRD2P25440 801 aaKnown RBP13.16□□□□□ -0.3
SPIDR-210ENST00000519362 TMOD1P28289 359 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 MAN1A1P33908 653 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 ACTN2P35609 894 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 MTMR3Q13615 1198 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 SPDYCQ5MJ68 293 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 MARCH8Q5T0T0 291 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 DPP9Q86TI2 863 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 WDTC1Q8N5D0 677 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-210ENST00000519362 FEZF2Q8TBJ5 459 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 PTPN18Q99952 460 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 BCO2Q9BYV7 579 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 ZNF518BQ9C0D4 1074 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 GBA2Q9HCG7 927 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-210ENST00000519362 GRHL1Q9NZI5 618 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 AKT3Q9Y243 479 aa13.16□□□□□ -0.3
SPIDR-210ENST00000519362 TMEM191CA6NGB0 347 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 LACTBL1A8MY62 500 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 TLR3O15455 904 aaKnown RBP13.15□□□□□ -0.3
SPIDR-210ENST00000519362 ZEB2O60315 1214 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 RPS6KA5O75582 802 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 VTNP04004 478 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 MMP3P08254 477 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 ARF4P18085 180 aaPredicted RBP13.15□□□□□ -0.3
SPIDR-210ENST00000519362 EIF4BP23588 611 aaKnown RBP13.15□□□□□ -0.3
SPIDR-210ENST00000519362 GBP1P32455 592 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 TAS2R40P59535 323 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 FAM110CQ1W6H9 321 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 ZNF394Q53GI3 561 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 EMC10Q5UCC4 262 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 SPRYD7Q5W111 196 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 RHOT1Q8IXI2 618 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 C1orf127Q8N9H9 656 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 TMEM35BQ8NCS4 154 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 TFAP2BQ92481 460 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 PARK7Q99497 189 aaKnown RBP13.15□□□□□ -0.3
SPIDR-210ENST00000519362 HERPUD2Q9BSE4 406 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 TINF2Q9BSI4 451 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 ABHD16BQ9H3Z7 469 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 VRTNQ9H8Y1 702 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 ZHX1Q9UKY1 873 aaPredicted RBP13.15□□□□□ -0.3
SPIDR-210ENST00000519362 SNX24Q9Y343 169 aa13.15□□□□□ -0.3
SPIDR-210ENST00000519362 O00370 1275 aa13.14□□□□□ -0.31
SPIDR-210ENST00000519362 CALB1P05937 261 aa13.14□□□□□ -0.31
SPIDR-210ENST00000519362 RPL21P46778 160 aaKnown RBP13.14□□□□□ -0.31
SPIDR-210ENST00000519362 YWHAEP62258 255 aaKnown RBP13.14□□□□□ -0.31
SPIDR-210ENST00000519362 DHX9Q08211 1270 aaKnown RBP13.14□□□□□ -0.31
SPIDR-210ENST00000519362 KLF1Q13351 362 aaPredicted RBP13.14□□□□□ -0.31
SPIDR-210ENST00000519362 ACVR2BQ13705 512 aa13.14□□□□□ -0.31
SPIDR-210ENST00000519362 PPP1R15BQ5SWA1 713 aa13.14□□□□□ -0.31
SPIDR-210ENST00000519362 DAB2IPQ5VWQ8 1189 aa13.14□□□□□ -0.31
SPIDR-210ENST00000519362 SCARA5Q6ZMJ2 495 aa13.14□□□□□ -0.31
SPIDR-210ENST00000519362 PLEKHH3Q7Z736 793 aa13.14□□□□□ -0.31
SPIDR-210ENST00000519362 KATNAL2Q8IYT4 538 aa13.14□□□□□ -0.31
SPIDR-210ENST00000519362 MAIP1Q8WWC4 291 aa13.14□□□□□ -0.31
SPIDR-210ENST00000519362 ASB7Q9H672 318 aa13.14□□□□□ -0.31
SPIDR-210ENST00000519362 POLIQ9UNA4 740 aa13.14□□□□□ -0.31
SPIDR-210ENST00000519362 ZNF236Q9UL36 1845 aa13.14□□□□□ -0.31
SPIDR-210ENST00000519362 TSPAN1O60635 241 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 GJB6O95452 261 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 KCNJ1P48048 391 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 RPL7AP62424 266 aaKnown RBP13.13□□□□□ -0.31
SPIDR-210ENST00000519362 SKOR1P84550 965 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 ZNF844Q08AG5 666 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 GRIK4Q16099 956 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 KYAT1Q16773 422 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 SLC10A6Q3KNW5 377 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 ZNF667Q5HYK9 610 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 CEP85LQ5SZL2 805 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 IQSEC1Q6DN90 963 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 JADE1Q6IE81 842 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 CCDC105Q8IYK2 499 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 FBXO25Q8TCJ0 367 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 CPB2Q96IY4 423 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 ATP6V1G3Q96LB4 118 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 PPP1R16BQ96T49 567 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 TMBIM4Q9HC24 238 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 NXF1Q9UBU9 619 aaKnown RBP13.13□□□□□ -0.31
SPIDR-210ENST00000519362 PARP2Q9UGN5 583 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 IP6K2Q9UHH9 426 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 A0A1B0GUA9 196 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 ADCY6O43306 1168 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 ITGB3P05106 788 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 KRT19P08727 400 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 ATICP31939 592 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 PLTPP55058 493 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 ZNF252P-AS1Q0IIN9 211 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 WDR72Q3MJ13 1102 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 SGO2Q562F6 1265 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 KCTD16Q68DU8 428 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 KIAA0319LQ8IZA0 1049 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 SH2D3CQ8N5H7 860 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 OR6J1Q8NGC5 347 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 EXD1Q8NHP7 514 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 NPLOC4Q8TAT6 608 aa13.13□□□□□ -0.31
SPIDR-210ENST00000519362 UBLCP1Q8WVY7 318 aaPredicted RBP13.13□□□□□ -0.31
SPIDR-210ENST00000519362 SDCBP2Q9H190 292 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms