RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 ODF2Q5BJF6 829 aa10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 CCDC137Q6PK04 289 aaKnown RBP10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 ZDHHC24Q6UX98 284 aa10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 SV2AQ7L0J3 742 aa10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 SLC13A5Q86YT5 568 aaPredicted RBP10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 CFAP61Q8NHU2 1237 aa10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 TAS1R2Q8TE23 839 aa10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 NSUN6Q8TEA1 469 aaKnown RBP10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 TEKT4Q8WW24 435 aa10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 ATG4CQ96DT6 458 aa10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 PLEKHG4BQ96PX9 1271 aa10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 KIFC3Q9BVG8 833 aa10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 GRHL1Q9NZI5 618 aa10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 GABBR1Q9UBS5 961 aa10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 MTRF1LQ9UGC7 380 aaKnown RBP10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 NOVA2Q9UNW9 492 aaKnown RBP10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 DOCK1Q14185 1865 aa10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 RLFQ13129 1914 aa10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 MYH9P35579 1960 aaKnown RBP10.73□□□□□ -0.69
SH2D4A-204ENST00000519207 ATP2C2O75185 946 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 PYGMP11217 842 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 CCNB1P14635 433 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 ATP6V1C1P21283 382 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 COILP38432 576 aaPredicted RBP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 SKIV2L2P42285 1042 aaKnown RBP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 RGS19P49795 217 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 TUBP50607 506 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 PLTPP55058 493 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 BACE1P56817 501 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 CLDN10P78369 228 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 CLEC16AQ2KHT3 1053 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 OR52E8Q6IFG1 317 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 AADACL2Q6P093 401 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 C15orf39Q6ZRI6 1047 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 CYFIP1Q7L576 1253 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 ZNF677Q86XU0 584 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 ZDHHC14Q8IZN3 488 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 GBP7Q8N8V2 638 aaPredicted RBP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 REPS2Q8NFH8 660 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 FBXO25Q8TCJ0 367 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 DHX38Q92620 1227 aaKnown RBP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 SLCO2A1Q92959 643 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 PGM2Q96G03 612 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 IFT74Q96LB3 600 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 POP1Q99575 1024 aaKnown RBP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 SYT15Q9BQS2 421 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 EPB41L4BQ9H329 900 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 PIDD1Q9HB75 910 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 AS3MTQ9HBK9 375 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 AVENQ9NQS1 362 aaPredicted RBP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 ABCF3Q9NUQ8 709 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 ARHGAP28Q9P2N2 729 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 ADAMTS5Q9UNA0 930 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 SNX24Q9Y343 169 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 COL11A1P12107 1806 aaPredicted RBP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 SPDYE5A6NIY4 337 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 IGF2BP3O00425 579 aaKnown RBP eCLIP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 HNRNPDLO14979 420 aaKnown RBP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 ATMINO43313 823 aaPredicted RBP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 SMIM24O75264 130 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 UBOX5O94941 541 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 KRT16P08779 473 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 MYBL1P10243 752 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 MSH2P43246 934 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 RPL21P46778 160 aaKnown RBP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 BPIFB4P59827 614 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 CUL3Q13618 768 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 SIX1Q15475 284 aaPredicted RBP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 GNPTABQ3T906 1256 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 TNFAIP8L3Q5GJ75 292 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 DCAF15Q66K64 600 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 DENND2CQ68D51 928 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 TTC27Q6P3X3 843 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 TRMT1LQ7Z2T5 733 aaKnown RBP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 AZIN2Q96A70 460 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 FAM136AQ96C01 138 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 TRIM11Q96F44 468 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 C12orf42Q96LP6 360 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 TRAPPC9Q96Q05 1148 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 TMEM109Q9BVC6 243 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 LRRC19Q9H756 370 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 ACP6Q9NPH0 428 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 TOPORSQ9NS56 1045 aaPredicted RBP10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 ZNF112Q9UJU3 913 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 C2CD2Q9Y426 696 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 RIPK3Q9Y572 518 aa10.72□□□□□ -0.69
SH2D4A-204ENST00000519207 PHIPQ8WWQ0 1821 aa10.71□□□□□ -0.69
SH2D4A-204ENST00000519207 LRRD1A4D1F6 860 aa10.71□□□□□ -0.69
SH2D4A-204ENST00000519207 FSCN2O14926 492 aa10.71□□□□□ -0.69
SH2D4A-204ENST00000519207 ATP2A1O14983 1001 aa10.71□□□□□ -0.69
SH2D4A-204ENST00000519207 EXTL3O43909 919 aa10.71□□□□□ -0.69
SH2D4A-204ENST00000519207 SNX3O60493 162 aa10.71□□□□□ -0.69
SH2D4A-204ENST00000519207 UNGP13051 313 aaPredicted RBP10.71□□□□□ -0.69
SH2D4A-204ENST00000519207 SLC1A1P43005 524 aa10.71□□□□□ -0.69
SH2D4A-204ENST00000519207 PSMC4P43686 418 aa10.71□□□□□ -0.69
SH2D4A-204ENST00000519207 TTLL12Q14166 644 aaPredicted RBP10.71□□□□□ -0.69
SH2D4A-204ENST00000519207 TAF11Q15544 211 aa10.71□□□□□ -0.69
SH2D4A-204ENST00000519207 SWSAP1Q6NVH7 229 aa10.71□□□□□ -0.69
SH2D4A-204ENST00000519207 REM2Q8IYK8 340 aaPredicted RBP10.71□□□□□ -0.69
SH2D4A-204ENST00000519207 LRRC34Q8IZ02 419 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms