RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 SALL4Q9UJQ4 1053 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 ANO9A1A5B4 782 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.29
SPIDR-209ENST00000519141 ZNF623O75123 536 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 FTLP02792 175 aaPredicted RBP13.21□□□□□ -0.29
SPIDR-209ENST00000519141 SKIP12755 728 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 SELPP16109 830 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 MLH1P40692 756 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 PNPLA4P41247 253 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 CLEC16AQ2KHT3 1053 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 C9orf57Q5W0N0 161 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 LRRC8DQ7L1W4 858 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 MRPL10Q7Z7H8 261 aaKnown RBP13.21□□□□□ -0.29
SPIDR-209ENST00000519141 RFFLQ8WZ73 363 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 ZFP42Q96MM3 310 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 MMS19Q96T76 1030 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 ADAM2Q99965 735 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 RNF19AQ9NV58 838 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 SLC38A7Q9NVC3 462 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 GIT1Q9Y2X7 761 aa13.21□□□□□ -0.29
SPIDR-209ENST00000519141 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.21□□□□□ -0.29
SPIDR-209ENST00000519141 A0A0U1RQF3 1178 aa13.21□□□□□ -0.3
SPIDR-209ENST00000519141 PTGESO14684 152 aa13.21□□□□□ -0.3
SPIDR-209ENST00000519141 PPEF2O14830 753 aa13.21□□□□□ -0.3
SPIDR-209ENST00000519141 NOP2P46087 812 aaKnown RBP13.21□□□□□ -0.3
SPIDR-209ENST00000519141 CDH8P55286 799 aa13.21□□□□□ -0.3
SPIDR-209ENST00000519141 ZNF394Q53GI3 561 aa13.21□□□□□ -0.3
SPIDR-209ENST00000519141 LPPQ93052 612 aa13.21□□□□□ -0.3
SPIDR-209ENST00000519141 PGBD4Q96DM1 585 aa13.21□□□□□ -0.3
SPIDR-209ENST00000519141 PPP1R10Q96QC0 940 aaKnown RBP13.21□□□□□ -0.3
SPIDR-209ENST00000519141 SDCBP2Q9H190 292 aa13.21□□□□□ -0.3
SPIDR-209ENST00000519141 L2HGDHQ9H9P8 463 aa13.21□□□□□ -0.3
SPIDR-209ENST00000519141 TANC1Q9C0D5 1861 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 TDRD15B5MCY1 1934 aaKnown RBP13.2□□□□□ -0.3
SPIDR-209ENST00000519141 FAM170AA1A519 330 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 MEIS3P2A8K0S8 358 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 PIRO00625 290 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 CILPO75339 1184 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 PAEPP09466 180 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-209ENST00000519141 SOX4Q06945 474 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-209ENST00000519141 MBTPS1Q14703 1052 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 SV2CQ496J9 727 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 ACAD10Q6JQN1 1059 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 PPP1R2P3Q6NXS1 205 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 ANKLE1Q8NAG6 615 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 RNF169Q8NCN4 708 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 DIS3LQ8TF46 1054 aaKnown RBP13.2□□□□□ -0.3
SPIDR-209ENST00000519141 PAWRQ96IZ0 340 aaKnown RBP13.2□□□□□ -0.3
SPIDR-209ENST00000519141 GAD1Q99259 594 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 THAP2Q9H0W7 228 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 RSAD1Q9HA92 442 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 JRKLQ9Y4A0 524 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 PCDHGC5Q9Y5F6 944 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 SNX9Q9Y5X1 595 aa13.2□□□□□ -0.3
SPIDR-209ENST00000519141 ARL5CA6NH57 179 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 ENC1O14682 589 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 PQBP1O60828 265 aaKnown RBP13.19□□□□□ -0.3
SPIDR-209ENST00000519141 PALMO75781 387 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 CYP1A1P04798 512 aaPredicted RBP13.19□□□□□ -0.3
SPIDR-209ENST00000519141 THP07101 528 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 UNGP13051 313 aaPredicted RBP13.19□□□□□ -0.3
SPIDR-209ENST00000519141 CD19P15391 556 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 IBSPP21815 317 aaPredicted RBP13.19□□□□□ -0.3
SPIDR-209ENST00000519141 BRD2P25440 801 aaKnown RBP13.19□□□□□ -0.3
SPIDR-209ENST00000519141 LRPAP1P30533 357 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 NSFP46459 744 aaKnown RBP13.19□□□□□ -0.3
SPIDR-209ENST00000519141 TAF6P49848 677 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 TERF1P54274 439 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 GPC5P78333 572 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 INCA1Q0VD86 236 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 TUBB2AQ13885 445 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 NAA35Q5VZE5 725 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 AGMOQ6ZNB7 445 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 RHOT2Q8IXI1 618 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 MYRIPQ8NFW9 859 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 ZNF606Q8WXB4 792 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 DPF3Q92784 378 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 ARHGEF26Q96DR7 871 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 TRIM11Q96F44 468 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 TUBB2BQ9BVA1 445 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 GOLGA2P5Q9HBQ8 144 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 UBN1Q9NPG3 1134 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 BARX2Q9UMQ3 279 aaPredicted RBP13.19□□□□□ -0.3
SPIDR-209ENST00000519141 MRFAP1Q9Y605 127 aa13.19□□□□□ -0.3
SPIDR-209ENST00000519141 MED7O43513 233 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 LSM8O95777 96 aaKnown RBP13.18□□□□□ -0.3
SPIDR-209ENST00000519141 ATP1A1P05023 1023 aaKnown RBP13.18□□□□□ -0.3
SPIDR-209ENST00000519141 SCNN1GP51170 649 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 ATN1P54259 1190 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-209ENST00000519141 RAD23BP54727 409 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 NOMO3P69849 1222 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 CENPCQ03188 943 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 ECHDC2Q86YB7 292 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 PASD1Q8IV76 773 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 TPCN2Q8NHX9 752 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 SLC35G2Q8TBE7 412 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 WHAMMQ8TF30 809 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 ZNF653Q96CK0 615 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 297 ms