RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 PPFIA4O75335 1185 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 SCAF4O95104 1147 aaKnown RBP5.55□□□□□ -1.52
SQLE-202ENST00000518604 ABHD16AO95870 558 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 HLA-DOAP06340 250 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 FCER1AP12319 257 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 BRAFP15056 766 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 ZNF20P17024 532 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 PHKA1P46020 1223 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 ZNF135P52742 658 aaPredicted RBP5.55□□□□□ -1.52
SQLE-202ENST00000518604 AK2P54819 239 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 SUMO3P55854 103 aaPredicted RBP5.55□□□□□ -1.52
SQLE-202ENST00000518604 ADAM17P78536 824 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 ZNF844Q08AG5 666 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 FAM160B1Q5W0V3 765 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 COL23A1Q86Y22 540 aaPredicted RBP5.55□□□□□ -1.52
SQLE-202ENST00000518604 C1orf210Q8IVY1 113 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 CFAP52Q8N1V2 620 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 PDPRQ8NCN5 879 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 CPT1CQ8TCG5 803 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 MARS2Q96GW9 593 aaKnown RBP5.55□□□□□ -1.52
SQLE-202ENST00000518604 ZC3H10Q96K80 434 aaKnown RBP5.55□□□□□ -1.52
SQLE-202ENST00000518604 NEU1Q99519 415 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 P2RX7Q99572 595 aaKnown RBP5.55□□□□□ -1.52
SQLE-202ENST00000518604 KRTAP3-1Q9BYR8 98 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 UNKQ9C0B0 810 aaKnown RBP5.55□□□□□ -1.52
SQLE-202ENST00000518604 TINAGL1Q9GZM7 467 aaPredicted RBP5.55□□□□□ -1.52
SQLE-202ENST00000518604 TRPM5Q9NZQ8 1165 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 RGS17Q9UGC6 210 aaPredicted RBP5.55□□□□□ -1.52
SQLE-202ENST00000518604 AFF4Q9UHB7 1163 aaKnown RBP5.55□□□□□ -1.52
SQLE-202ENST00000518604 FPGT-TNNI3KV9GXZ4 949 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 RHPN2P1A8MT19 583 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 AHRRA9YTQ3 701 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 E7ENX8 843 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 E9PLN8 166 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 ZNF185O15231 689 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 RPS6KA4O75676 772 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 SOAT2O75908 522 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 IFIT2P09913 472 aaKnown RBP5.54□□□□□ -1.52
SQLE-202ENST00000518604 XRCC6P12956 609 aaKnown RBP eCLIP5.54□□□□□ -1.52
SQLE-202ENST00000518604 TAP2Q03519 686 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 RAB32Q13637 225 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 PDCD4Q53EL6 469 aaKnown RBP5.54□□□□□ -1.52
SQLE-202ENST00000518604 CRB2Q5IJ48 1285 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 LMBRD2Q68DH5 695 aaPredicted RBP5.54□□□□□ -1.52
SQLE-202ENST00000518604 IL31Q6EBC2 164 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 PPP1R32Q7Z5V6 425 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 DPP9Q86TI2 863 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 MAPKAPK5Q8IW41 473 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 CELF5Q8N6W0 485 aaKnown RBP5.54□□□□□ -1.52
SQLE-202ENST00000518604 IL17DQ8TAD2 202 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 MOGAT1Q96PD6 335 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 SMOQ99835 787 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 VKORC1Q9BQB6 163 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 ZNF518BQ9C0D4 1074 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 RNF181Q9P0P0 153 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 SRRDQ9UH36 339 aa5.54□□□□□ -1.52
SQLE-202ENST00000518604 CCDC195A0A1B0GUA6 201 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 TRIM43BA6NCK2 446 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 C1QTNF3-AMACRE9PGA6 284 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 MYO1CO00159 1063 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 PLSCR1O15162 318 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 DNAJB5O75953 348 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 UNC5CO95185 931 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 GPANK1O95872 356 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 CFIP05156 583 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 GRPP07492 148 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 PIM1P11309 404 aaPredicted RBP5.53□□□□□ -1.52
SQLE-202ENST00000518604 CYP2C9P11712 490 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 FGFR4P22455 802 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 FDXRP22570 491 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 TM4SF4P48230 202 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 NEK3P51956 506 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 SLC13A2Q13183 592 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 BRD3Q15059 726 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 CDSNQ15517 529 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 SPDYE7PQ495Y7 208 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 USP39Q53GS9 565 aaKnown RBP5.53□□□□□ -1.52
SQLE-202ENST00000518604 SYCP2LQ5T4T6 812 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 TMEM132CQ8N3T6 1108 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 TRIM43Q96BQ3 446 aaPredicted RBP5.53□□□□□ -1.52
SQLE-202ENST00000518604 BOD1Q96IK1 185 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 TNIP3Q96KP6 325 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 ELAC2Q9BQ52 826 aaKnown RBP5.53□□□□□ -1.52
SQLE-202ENST00000518604 SPATA5L1Q9BVQ7 753 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 APOL5Q9BWW9 433 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 TLR10Q9BXR5 811 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 SMURF2Q9HAU4 748 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 CEP72Q9P209 647 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 CPNE7Q9UBL6 633 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 KCNE5Q9UJ90 142 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 PHTF1Q9UMS5 762 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 AGAP1Q9UPQ3 857 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 TMX2Q9Y320 296 aa5.53□□□□□ -1.52
SQLE-202ENST00000518604 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.53□□□□□ -1.52
SQLE-202ENST00000518604 A0A087WWL8 130 aa5.52□□□□□ -1.53
SQLE-202ENST00000518604 MYADML2A6NDP7 307 aa5.52□□□□□ -1.53
SQLE-202ENST00000518604 POLRMTO00411 1230 aaKnown RBP5.52□□□□□ -1.53
SQLE-202ENST00000518604 KCNA2P16389 499 aa5.52□□□□□ -1.53
SQLE-202ENST00000518604 BMPR1AP36894 532 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms