RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 IGF2RP11717 2491 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 ZFYVE26Q68DK2 2539 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 TMEM8BA6NDV4 472 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 OR6C75A6NL08 312 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 CCDC169A6NNP5 214 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 BTBD18B2RXH4 712 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 M0QZQ0 153 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 EXTL3O43909 919 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 CTDNEP1O95476 244 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 MCM7P33993 719 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 MCM2P49736 904 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 GRSF1Q12849 480 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 GPR17Q13304 367 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 DMP1Q13316 513 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 ORC2Q13416 577 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 TRIM29Q14134 588 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 STXBP5Q5T5C0 1151 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 MPZL3Q6UWV2 235 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 USP37Q86T82 979 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 TTC8Q8TAM2 541 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 BPIFB1Q8TDL5 484 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 PSMG2Q969U7 264 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 ZFYVE19Q96K21 471 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 TMEM209Q96SK2 561 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 DNAJC25Q9H1X3 360 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 TMEM60Q9H2L4 133 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 BHMT2Q9H2M3 363 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 ATXN3LQ9H3M9 355 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 HSFX1Q9UBD0 423 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 ZMYM5Q9UJ78 669 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 ZMIZ1Q9ULJ6 1067 aa12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 RBM19Q9Y4C8 960 aaKnown RBP12.5□□□□□ -0.41
TRAPPC9-203ENST00000517667 WNT7AO00755 349 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 FDPSP14324 419 aaKnown RBP12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 PROZP22891 400 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 NPTX2P47972 431 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 NOVA1P51513 510 aaKnown RBP12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 PEX3P56589 373 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 AMPD2Q01433 879 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 DUSP4Q13115 394 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 ACAP1Q15027 740 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 KARSQ15046 597 aaKnown RBP12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 ANKRD1Q15327 319 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 ELF2Q15723 593 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 GPR158Q5T848 1215 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 DAB2IPQ5VWQ8 1189 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 GAREM2Q75VX8 874 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 KDF1Q8NAX2 398 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 DRC1Q96MC2 740 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 LRRC3BQ96PB8 259 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 PGLYRP2Q96PD5 576 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 GCNAQ96QF7 691 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 MKNK1Q9BUB5 465 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 EDEM2Q9BV94 578 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 ARHGAP28Q9P2N2 729 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 SDK1Q7Z5N4 2213 aa12.49□□□□□ -0.41
TRAPPC9-203ENST00000517667 C1QTNF9BB2RNN3 333 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 TOM1L1O75674 476 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 RHOBTB1O94844 696 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 VNN2O95498 520 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 OR52Z1P0C646 297 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 C1QTNF9P0C862 333 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 GABRR2P28476 465 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 PXNP49023 591 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 TNK2Q07912 1038 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 MYBPC2Q14324 1141 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 NOLC1Q14978 699 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 PLK5Q496M5 336 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 TMEM196Q5HYL7 178 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 CENPPQ6IPU0 288 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 DNAJB7Q7Z6W7 309 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 EXOC4Q96A65 974 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 TARS2Q9BW92 718 aaKnown RBP12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 SMOC1Q9H4F8 434 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 TASP1Q9H6P5 420 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 C17orf75Q9HAS0 396 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 KMT5AQ9NQR1 393 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 TUBGCP4Q9UGJ1 667 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 STK24Q9Y6E0 443 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 TSC2P49815 1807 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 KIAA1549LQ6ZVL6 1849 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 PKD1L2Q7Z442 2459 aa12.48□□□□□ -0.41
TRAPPC9-203ENST00000517667 DENND4CQ5VZ89 1909 aa12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 MTMR11A4FU01 709 aa12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 ABLIM1O14639 778 aa12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 TRDMT1O14717 391 aaKnown RBP12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 PRAMEF12O95522 483 aa12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 OR4Q2P0C623 313 aa12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 HARSP12081 509 aaKnown RBP12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 CYP3A5P20815 502 aa12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 CDC25CP30307 473 aa12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 LRPAP1P30533 357 aa12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 HOXC13P31276 330 aa12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 CCT6AP40227 531 aaKnown RBP12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 AARSP49588 968 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 CACNB1Q02641 598 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 ZNF252P-AS1Q0IIN9 211 aa12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 STRN3Q13033 797 aa12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 VEPH1Q14D04 833 aa12.47□□□□□ -0.41
TRAPPC9-203ENST00000517667 SLC10A6Q3KNW5 377 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms